Gene
RNA
| Item | Value |
|---|---|
| gene id | G23652 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000003 |
| NCBI id | null |
| chromosome length | 2831192 |
| location | 1790370 ~ 1790781 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU26683 | False | 412 | lncRNA | 0.33 | 1 | 1790370 | 1790781 |
| TU26684 | True | 301 | lncRNA | 0.36 | 1 | 1790370 | 1790670 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000003_01632757_01671893 | EGFRA | coding | downstream | 118477 | 1630607 ~ 1671893 (-) |
| CI01000003_01601113_01624224 | NA | coding | downstream | 166146 | 1600965 ~ 1624224 (-) |
| CI01000003_01424386_01424816 | NA | coding | downstream | 365455 | 1424350 ~ 1424915 (-) |
| CI01000003_01368353_01374263 | YME1L1B, YME1L1 | coding | downstream | 416107 | 1368353 ~ 1374263 (-) |
| CI01000003_01348419_01352984 | RAB18B, RAB18, RAB18A | coding | downstream | 437386 | 1346599 ~ 1352984 (-) |
| CI01000003_01807697_01809455 | C1QL3, C1QL3B | coding | upstream | 16349 | 1807130 ~ 1809455 (-) |
| CI01000003_01836259_01849326 | GPT2L, ALAT2 | coding | upstream | 45419 | 1836200 ~ 1849326 (-) |
| CI01000003_01856167_01857447 | FUZ | coding | upstream | 64060 | 1854126 ~ 1857447 (-) |
| CI01000003_01870680_01887249 | NA | coding | upstream | 79564 | 1870345 ~ 1887255 (-) |
| CI01000003_01931888_01950409 | DNAJB4 | coding | upstream | 140239 | 1931020 ~ 1950496 (-) |
| G23639 | NA | non-coding | downstream | 440 | 1789437 ~ 1789930 (-) |
| G23582 | NA | non-coding | downstream | 220474 | 1552659 ~ 1569896 (-) |
| G23577 | NA | non-coding | downstream | 246812 | 1543335 ~ 1543558 (-) |
| G23576 | NA | non-coding | downstream | 247893 | 1542105 ~ 1542477 (-) |
| G23566 | NA | non-coding | downstream | 281611 | 1508456 ~ 1508759 (-) |
| G23657 | NA | non-coding | upstream | 12782 | 1803563 ~ 1803934 (-) |
| G23628 | NA | non-coding | upstream | 69136 | 1859917 ~ 1863447 (-) |
| G23644 | NA | non-coding | upstream | 73817 | 1864598 ~ 1866129 (-) |
| G23675 | NA | non-coding | upstream | 124721 | 1915502 ~ 1915724 (-) |
| G22716 | NA | other | downstream | 1720626 | 50512 ~ 69744 (-) |
