CI01000003_01870680_01887249


Basic Information

Item Value
gene id CI01000003_01870680_01887249
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000003
NCBI id null
chromosome length 2831192
location 1870345 ~ 1887255 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000003_01870680_01887249.mRNA
ACCCTTATGGTCTCGCACACAATTTTCTGTACTGTCCAGCAGATGGAGCAGGAGTATTTCCAAACACTGGAATCCTCACCAGAACTCTGTCATGGGCTTCCAGGATTCCTAAGATACAAAAGAGAGTCCCAGGAGAGGATGTACAGTCATCAGTTCTGTGGTTCAAGAGCTTGGCCTCCTCTGGATCCAGGATATGCGGAGACACAAGAGGACTTCTGCTGTGGGAACTACAGAGAGTTGTTTGAGATTGTGGTCCATGAAAAGCATCTGTCTACGAGAAGTTCTGAGGCACGGCTTAACAGACCTGGTGGAATAGATGACCCCTTCATCAATGAGAATGAAGAGCTACAAGATAAAGCACAAGATAGAGGAAAACACAGTTTCAGACAGCAGCAGAGAGAGATGCAGAGATATGACAGAGTTGCTCACTCCAGTTTATTGGCATCGACGAACAATGTGTCTCATGATAAAACAGTCATCAGTTTCCGTCTTTCTAACTGTGCACCCAAAGAGGATTTTTGGAAAGTTAAAGAGTACAAGCATGTGGACGAGATCTCTGGACAATGGCCATGTGATGAGTCTTCTGTACTGGGGTCAGTTGAGTTTGGCTTAACTCATCACCAGAACAATTCAAGTTTCTTGGAGAAGTACTACTCAAATGGAAATAAATTCCTCACTGTGTTTCCAGATGGAAACTTGGCTCTCATCATTCTCAGCTGTAAAAAGGAAAGGATCTGTATCGTACGAGATGACATGACGACGACTCTTTGTCCAGTCAGAGCCCTCTTTCAGTCTAATGGCAGAGCCACTTGTTACCATGGCAAAGGCAGCATTTGGTTGAGTATGGATGCTTGGGGTGGGCGGTGTCTAGATGAGAGCGGGAGGAGGATCAGAACATGGAGCTGGACAGACCAGGCTCAAACACCAACACCCCTGAGACCACTCTTTCTGGCACTCAACAGAAATATAGGGGTTCGGGTTCTTGGGCAACAGTTGGTGTTTGTATCATTCCTTGCTTCAGGACAACAAGCCAGGTTCAGAGTAGGCAGCTGTGAGTCGTCCAAAGAACACAACACACCTCCTCAACCCCTCATGTGCAAAGAGGAGCTAGTACTTCTGGCATGCAGGGTTGGCCTTCACATGGCTCTGATACGGTTACAGCAGTGCCAAGCCTTCCCATCCAGCCCCACACATCTGCGGGTCAGACCTCCACCTTTCCTTCACTCGCTGGTCCGAAGGCTGCGGAGTTTGAGCCACAGAGTACAAATGGAAGAGCCAGACAAGGCCTTTATCCAGCGCTGTCTGCAGGCCTATCCATGAACTGACACAAAACATGCTAGAATAGTCTCGTTTGACTTAACGGTACAGTCACATTAGCAAAATTACATGAGAAAATAAGTTCCATTGTCTATTGTAAATAGTGTTGCGATTGAGGCACAGCTCACACAGAAGTCACTTTCAAACAAAGAAGCTTGCTATGGCCAACGCGGCAAATTTGCTACTTGAACCCATTGTGAAATATGCATGGGGAAATCTTTTGCCCTCACTCGAAATTCTAATGGCTTGGTGTCCTATTAGAATGACTGCTAAATTGCCTGCTGAAATATGCCAAGCAATGGTAAATGTGACCATACCTTGACAAACTTAACAAAAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000003_01870680_01887249.mRNA True 1655 mRNA 0.46 9 1870345 1887255

Neighbor

gene id symbol gene type direction distance location
CI01000003_01856167_01857447 FUZ coding downstream 12898 1854126 ~ 1857447 (-)
CI01000003_01836259_01849326 GPT2L, ALAT2 coding downstream 21019 1836200 ~ 1849326 (-)
CI01000003_01807697_01809455 C1QL3, C1QL3B coding downstream 60890 1807130 ~ 1809455 (-)
CI01000003_01632757_01671893 EGFRA coding downstream 198452 1630607 ~ 1671893 (-)
CI01000003_01601113_01624224 NA coding downstream 246121 1600965 ~ 1624224 (-)
CI01000003_01931888_01950409 DNAJB4 coding upstream 43765 1931020 ~ 1950496 (-)
CI01000003_02091233_02092464 NA coding upstream 203829 2091084 ~ 2092685 (-)
CI01000003_02221239_02254635 PIGK, PIGK.S coding upstream 333943 2221198 ~ 2254635 (-)
CI01000003_02353398_02370544 ZZZ3 coding upstream 466143 2353398 ~ 2370544 (-)
CI01000003_02385930_02406911 USP33 coding upstream 498512 2385767 ~ 2406911 (-)
G23644 NA non-coding downstream 4216 1864598 ~ 1866129 (-)
G23628 NA non-coding downstream 6898 1859917 ~ 1863447 (-)
G23657 NA non-coding downstream 66411 1803563 ~ 1803934 (-)
G23652 NA non-coding downstream 79564 1790370 ~ 1790781 (-)
G23675 NA non-coding upstream 28247 1915502 ~ 1915724 (-)
G23694 NA non-coding upstream 82285 1969540 ~ 1975388 (-)
G23696 NA non-coding upstream 228275 2115530 ~ 2116646 (-)
G23755 NA non-coding upstream 230898 2118153 ~ 2118519 (-)
G23756 NA non-coding upstream 233203 2120458 ~ 2120671 (-)
G22716 NA other downstream 1800601 50512 ~ 69744 (-)

Expression


Co-expression Network