G23696


Basic Information

Item Value
gene id G23696
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000003
NCBI id null
chromosome length 2831192
location 2115530 ~ 2116646 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU26741
AGCAAGTACAAAAATGAGTGTGACAATCACATTGCTTAAAAAGCGAACATTTTGTGAATGCGTAACATTTTTTTTCTTTAAAAAAACCAAACACTGCAGTGCAACAGACAATAAGGAAGACAAGAAAAGAAAAAAGCAGCATAGTTACAGATGTTAAAGAAGACAAAGTGATAATATTAAACAACACGGAACAATCAGCTTCCACAACAGCAAAAATTTAAACTCCATAACAAGAAAAATAATATATTTTCCAATAATATAAATAAAGCATCATATTAATATGTGCTGCTGAAAAAGAACTTAAACAAACCTAAGATGGTTTCTGATCTTAGCTGGCATTTGGTCTGACAAATATGCCCATCTAAAACCAGCAAACTATCTTAGTAGATGGTTTTCTTTTCTTTCCCAGCAGGGTTATCAACAATATAGCTTTAAAACTTAGAAAACAATTATTTTATAATGCAACAAAGTGAACTGCTGATGTACATGTAGATACTCCATGCGGGTGTTTTCTCACACAGTTTTTCTTACAGTCATTGTAATTCCACAGAACAGCAGTGAAACTGGGGTTTTAAACTGTGAGCAGAAGCCTAGATGGGAGCACAGTACATATGGCAATGCCATCTGTTCAATGAAGGGCATCAGCACATTCCGGGAGAAATTATTTTGCAGGGAAATGTATGCATTTGATTAAAAAAACTGAAGTGATGAGTTAACTGACCTGCTTCAAAAAAGTTTCAGATGAACTACAGAATGTCGAGTGAATATCATTGACATAGCGGTCAAATGCCCACTGGCATTTAGCCTTAGAGGCCTTACAGGACTTTTAGAGTTACAGCACATATAAAGAATGTGAAAATGACAGATATGTTGAAATGAGATTTGCAAGCTGGAGTTGATGGGGTATTAAAGCTCATTTCCCCTCACTGTCCCATGGTTCATTTAGATTTTAATGAGGAATGTAACCATTGTTCATTATCAATTCCACAAAGGCTTCATTAATGTATGTCACCAACTAATAATCTGTAATTTATTATGTCATTTTCCGACCTGGACTTTCTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU26741 True 1063 lncRNA 0.39 2 2115530 2116646

Neighbor

gene id symbol gene type direction distance location
CI01000003_02091233_02092464 NA coding downstream 22845 2091084 ~ 2092685 (-)
CI01000003_01931888_01950409 DNAJB4 coding downstream 165034 1931020 ~ 1950496 (-)
CI01000003_01870680_01887249 NA coding downstream 228275 1870345 ~ 1887255 (-)
CI01000003_01856167_01857447 FUZ coding downstream 258083 1854126 ~ 1857447 (-)
CI01000003_01836259_01849326 GPT2L, ALAT2 coding downstream 266204 1836200 ~ 1849326 (-)
CI01000003_02221239_02254635 PIGK, PIGK.S coding upstream 104552 2221198 ~ 2254635 (-)
CI01000003_02353398_02370544 ZZZ3 coding upstream 236752 2353398 ~ 2370544 (-)
CI01000003_02385930_02406911 USP33 coding upstream 269121 2385767 ~ 2406911 (-)
CI01000003_02449147_02456088 FUBP1 coding upstream 331989 2448635 ~ 2456088 (-)
G23694 NA non-coding downstream 140142 1969540 ~ 1975388 (-)
G23675 NA non-coding downstream 199806 1915502 ~ 1915724 (-)
G23644 NA non-coding downstream 249401 1864598 ~ 1866129 (-)
G23628 NA non-coding downstream 252083 1859917 ~ 1863447 (-)
G23755 NA non-coding upstream 1507 2118153 ~ 2118519 (-)
G23756 NA non-coding upstream 3812 2120458 ~ 2120671 (-)
G23757 NA non-coding upstream 6147 2122793 ~ 2123064 (-)
G23759 NA non-coding upstream 9177 2125823 ~ 2126095 (-)
G23760 NA non-coding upstream 10320 2126966 ~ 2127167 (-)
G22716 NA other downstream 2045786 50512 ~ 69744 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
tiger barb (Puntius tetrazona) G8222 dnajb4,LOC107681825,LOC107599850,LOC107708915,LOC107566472,LOC107751861,LOC107690981 non-coding NC_056700.1 CM032069.1 680687 ~ 782745 (+)
mexican tetra (Astyanax mexicanus) G9073 NA non-coding NC_035898.1 CM008301.1 8594824 ~ 8595863 (+)