CI01000004_06273065_06297895


Basic Information

Item Value
gene id CI01000004_06273065_06297895
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 6273065 ~ 6298274 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_06273065_06297895.mRNA
TACAGCACATTGGAAACTTAAAGAGTGAATCTCTCAGACTGGTGATGACGTCCATTCACAGCCCTCAGTGGTTGATGGGGGACCACTTCTGGATTGACTCCAGTATTGGGGTCCCTATTGGAGGGTGTGTGAAGATCTCAGAGAGTGGACGCTATTACCTGACTGATGATGAAGGGAAGGACCACTTTATCTCGGAGGGAGAGAGGGCCAGTCTTAAGCCTATGCACCCCACCTCAGTGGAGGGTGTGGATGACATGATCAGACTGGGAGACCTCAGTGAAGCTGGTTTACTCAGAAATCTGCTAATGCGCCACAGACAGGGTATTATATATACCTATATTGGCTCTGTCCTAGTGGCAGTGAATCCCTATGAGATGCTGCCCATCTACACAGCTGATCAGGTGCACCTGTATCACAAGCGTAAGCTGGGCGAGCTCCCACCACACATCTTTGCCATTGCTGACAGTTGTTACTTCAACATGCGCCGCAATAACCGCAACCAGTGCTGCATTATCAGTGGAGAATCTGGTGCAGGAAAGACCGAAAGCACTAAACTGATTCTTCAGTTCCTGGCTGCTGTGAGCGGGCAGCACTCCTGGATAGAGCAGCAGATCATACAGGCCAACCCTGTCCTGGAGGCCTTTGGGAATGCCAAAACCATTCGCAATGACAACTCCAGCAGATTTGGGAAATATGTGGAGATCTTCTTTAATAAACAAGGTGTTATAGAGGGAGCTCACATGGAGCAGTACCTGTTGGAGAAGTCTCGTGTCTGTCATCAGGCACCACAAGAAAGGAACTACCACATTTTCTATTGTATGTTATCTGGGATGCAAAGTGAGCATAAGAAGACTCTCTCCCTTGGTAATGCATCACAGTTCAAGTACCTGACTGAGGGGGATTGTTTGACATGTGATGGTCGGGACGATGCTGATGAATTCGGACGGATTCGCGCTGCTCTAAAGATCCTCACTTTCTCAGACAAGGACTGCTGGGAAATCTTCAAATTACTGGCTGCCATTCTCCACATGGGCAATATCAACTTTCAGGGCACTATAATAAATAACATGGACAGCTGTGACGTTCTGTCATCAAATAATTTTTCTGTCTCTGCCAAGTTGTTGGAGGTAGAAGATGCAGTTCTTGAAAAGAGTCTTACCTATCGCTCCTTCATGACAAACAGAGAGATAGTCGCCAAACCACTCAGCTCAGAGCAGGCCACAGACACCAGAGATGCTTTTGCCAAGGCCATGTACGGAAGGCTGTTTGTTTGGATGTTCACAAAAATAAACAGCGCCATTCACAAACCCCAGACTGATGAGTCCTCTTACACGCGCAAGTACATTGGACTGCTTGACATTTTTGGCTTTGAGAATTTCCCTCAGAACAGTTTTGAGCAGCTGTGCATTAATTATGCCAATGAGCACCTGCAGCAGTTCTTTGTGAGACACGTCTTTAAGCTGGAGCAGGATGAATATAGTAAAGAAGGCATCTCATGGAAGCGCATTGCTTTCAATGACAACCAGAAAACCCTGGACCTGCTGGCCGTTAAACCTCTCAACATACTGGCTCTGATTGATGAAGAGAGCCACTTCCCTAAGGGAACAGATGCCACAATGTTAAACAAAATGAACCAAGAACACAATGGGAACAAACTGTACATCTCATCCAAGAGCAAACATGGCATGCATTTTGGGATTCAGCACTTTGCTGGGCTGGTTCATTACGACTGTGAAGGTTTTTTGGAGAAGAACAGAGATGCCCTGAGCATGGACATGATGGAGCTGGTTCGGAAATCTTCCAACAAGTTGCTCAAGCACATCTTTGAGAAGGAGATGAATACAAACTCAGTCAAGAATGCTAACAAAGCCAACAAGATCCTCATGACGCCAAAGAACTCATTACGTCAAGTAAATGATTCGAGGCGGCAGATATCTACTCTGAGTGGCCAGTTCCGTCAGTCTCTGGACTCTCTGATGAAGGCCCTGTCTCTTTGTCAGCCTTTCTTCATACGTTGCTTCAAACCAAATGACAAAAAGATGTCCATGGTTTTTGATAGAGAGCTCTGCATGCAGCAACTTCGCTACTCTGGAATGCTGGAGACCATTAGAATACGCAAGTCGGGATATCCCATCCGGCACACCTTTAAAGATTTCCTGTACCGCTATCGTGTGCTCCTGAAGACTGTAGATTGTGACCCCAAAACTGAGCCTCCTTCCAGCTGCTGTGCAGCCATCTGCAAGGCTATGATCAAAGAAGAAGAGGACTGGAAGATTGGCAACACCAAAATCTTTCTCAGGGATCATCATGATTCCTACCTAGAAATGGCGAGAGAGCAAGAGCTTTATAGGAAGGCACTTATCATCCAAAGAGTGATGCTTGCCCATAAGGACAGAGCAGCTTTTGTAAAGAAGAGGAGGGCAGCTCTGGTTTTGCAGAAAAACTGGCGTGGCCACAGAGACAGGAAAGACTTTTGCAAACTCAAGCAGGGATTTGCTCGGCTGCAGGCGAAAGTGCGCAGTCGGCAGCTCCATACAGAGTATAAGCGCAGGCGGGCTGCAACCATCACTCTACAAACACAGACCCGTGGCTACCTCGCCAGGAAAGACCTGAAATGTAAAAAAAAGGCAGTGATACTTCTGCAGACACAGACCAGAGGACTGCTGGCCAGGAAAACCCTCAAGAGAATGAAATCAGATGCGTTTTTGACTGCGCAAGAAAAAGAGGCTCAGGAACTGGCAGCACTGGAGCTTCAGCAACGCCTAGAGGAGCTGCTCAGAAAAAACGAGGAAGCAGCCAAATCCCAGACTAAGGAAGATGAGGAAATGGTGGAGAATCTCTTTGGCTTCATTCCGAGTGCATTAGGAGGACAAGAGGGCCCAGCCCCTGAGGGTTTTGAGGATTTAGAGGCAGAGCCGGTGAAGTTAGAAGAGGTTGAACTAGTAGAGAGCCCAGTAAGGGAGAGGAAAGTGATGTCAGTACCAGACATCAGCGAAGACGATCTAGATGATAAAGAGGAAGAGAAAGAAGCTGAGGATAAGAAAGAAGCTGAGGATGATGAGTTCTCTTTCGCTATATTTGCATCTCTACACTTTCAAGGATCTTCTACCCACTCACATATCAAACAGAGATTGCGGAAACCCCTGCTCTACCATGAGGATGAAGGGGATACCCTGGCAAGTGTTGTTCTCATTAGCATCATGTTCCCATTTAAAGCGAGGCTTGATAGTCAACTGGGACATTGTGTCTTTTTGACAGTATGGTGGATCATACTAAGATTTATGGGAGATCTTCCAGAGCCGAAGCAAGAACGTGTTTCTGCTATAGCCGACCCCATTCAGAGAAACCTCGGTCAGAGACAAGCACGACGACTTAGTAACCTTGTTGGATTAGATCAGAAATTTTTGAGAAAAAAAATGAAGCAGCAGAAGGGGACAGGGAAACGAAAACACTCAGCCATTCCTGAAGAAGAGCCAGAAGAAGTACCACAACCTAAAATGGAGGCTGTTCAGGAGGAAGAGGATGTAATGTTTGGAGAGGGACCAACTTTTGATCGTCCAATGACACCCTTGGAGAAATTACACACTATTGTGGGATATGCCATTGTACGACAAGATATAAGAGATGAAATCTACTGTCAGATCTGTAAGCAGTTAACAGACAATAAGAACCACAAAAGTGCAAACAGAGGCTGGATCCTTCTGTCCATCTGTTTGGGCATTTTTTCCCCTACAGACCGCCTCACTAAGTCTGTAGAGACCAAGAACCCCATTGCAGTGGTTGTGAGTCTGATGGATGGCAGAAGCATCAACCTCCATTTGGACTCAGCCAGCACTTCTGCAGAGGTGTGCAATACAGTTATCCAGAAAATAAACCTGAAGGACACTTATGGCTTCTCCCTATATGCTGCAATGAATGAGAAGATGTGGTCTCTAGGCAGTGGCAGTCAGCATGTCTTGGATGCCGTGTCTATGTGTGAGCAGGAAGAAAAGAGGCAGGGGAGAGAGGAACAGCATGCTCCTTGGCGCCTCTATTTCCGCAAAGAAATCTTCACTCCGTGGCATGACTGTTCATCTGACCAAGTCAGCACAGACCTCATCTATAGGCAGATCATCCATGGACTCAAACATGGAGACTATCAGTCTGATAAGGAGGATGATTATGTGCAGCTCGCAGCCAAACATTACTATATAAAGCATGGCTCTGAAAGCAGTATGGAAACTTCCCAGAAGATTGTTCGCGAGTGCATGAACATGACTATAATTGAGAACAAGTCTTTGGTCAAACTAGTGCAGTTGGTCCATTCTGCACACACACAGGGTCCTTACATAAACTCTACTACACCTGCCTATGAAGTGAAAGGAGAGATTGTCCAATACGCACGGCAGAAGTGGCCAGTCTATTTCTCCAAGTTATATGAGGCTCGCATGATTTCAGGTCCATCAATGTTTGAAGAACAGTTTGTAGTTGTCGTGAACTGGAAGGGGGTCTTCTTTCAGGACGAGACAGAAGCCGCATTTCTGCAGCTCTCTTATCCTGAGGTGTCAAGAATCGAAATGATGAGTGAGGAAAAGTCTAGTGGGATTGTATGTTTGACAACTCCAAAGGGGATGTATGAGCTGAAGGTTGTGAAGGGAAAAGAATTTGTGCATCTGGTCAACAAGTTCATCTCAGGGCTTAAGAAGAGATCTGAGTATGCTGTGGCAATACAGGACCTTAGCAGACAAGGTGCTTCTTTTAGAAAATTTAAAACCCTTGAATTTAACTATTTAATCAAGGATCCCACAATGCTGAGCTTCAGAAGGGGTGATGTGCTGTTTATCATAAAGGATGGAGAATATGCTTCTGAAGACGGCTGGATCAAAGCAAGGAATGAGAGGACAAGTCAAACTGGAGCAGTTTCCATAGATGCTATTCAGATTCTACCGATGTTGACTAGGCCTACAGAAGAAACACTGAATTTGCTGAATTTGACCCCAGCACGGAGAAAGTCAGTGATGCCGGTCTTGCCGCAGATGGAGGAGATCAGCACAGAGAGAGTTGCCCACATGACTCTCAAGGAGTTCTCTTTCGATTATTTCAGGGAGTCCGGTAAGGAAGGAGGTCGTAAGGGAGGAGCCAAAGAGAAACTATGGGCCAACAGCAAAGAGCCTCTGAAACAACCACTGCTCAGGAACCTGCAGGGCAACTCAGAGCTCTGCCATCTCGCTTGTGACTCCTTCACAGATATCCTTCCCGCTGACTGGCCGAAATATGAATCATTTGTTGAGTATGGAGCGAGGATGGCAGCTGTTGTGGCTGTGCTGTGGTCTCTTTCCTCCAAGTCAGTTGTTACTGAGGCATGCTCAACGTTTTCTGGAGTCCAGACCCAGAGAGCCACTGGCCTCCACCTGCCTGCAGAGGATGCAAGCCATGCTCAGATATTTGAGGTGACCACCACCACAAGGATCAGAGACTTATGTCGCAAAATTTCTAAAGACCTCCGACTCTCCTCATCGGATGGATACAGTCTGTTTGTGAAAACAGCCAATAAGGTAGTAAGTATGGATTCTGAAGAGTACTTTTTCGACAACCTCAGGCAACTCACAGATCAGGTCGTTAAAAAAGGAAAGAAAGTCAAGGAGGCTCCTTCAACTATTGTTCCTTACCTGGTGCTCTTCATGAGGAAGCTCTGGTTTAATGTGATCCCAGGGAAAGATCTAACCGCTGACCTAACGTTCCACTTTCCTCAGGAAGTGCCGAAGTATTTGCGGGGTTACCATAGTGTGTCTAAAGAGGACATGATCTTTCTGGGAGGACTGCTGCTCCGTACTCGGATTGACACGGATAAGTCACAGTTTGTCATGATCCCTCGAATGCTGAAAGATCTGGTTCCAGCTGATCAGCACAGGATCATGACTCCTGAGGACTGGAAAAAGCACATCATCAACTCATATAACAAGCAGGCAGGCATAACTGTAGATGAAGCCAAACTCCAGTTCCTGAAGATGATCTCACAGTGGCCCACCTTTGGATGTGCTTTCTTCGAAGTAAAGCAAACATCAGAGAAAAGTTACCCCAGTGTTATCATGATATCAATCAGCAAACTAGGAGTTAGCATCACCAACCCTAAGACAAAGGAGGTGCTTGTGATGCATCTATTCAGTAAGATCACTTCCTGGTCTAGCGGAAGCACCTATTTTCACATGACCATTGGCAATCTAGTGCAGGGCAACACTCTGCTCTGTGAGACCTCACTGGGTTATAAAATAAGTGATCTCCTGTCCTCTTACAAGAACATGTATATGAAGGAGATAACAGTGGTGCGGCCCAGAAATCAATTGTTCTCTTGAATCATCATGTAGTATGATCATTTTTGGTAGCATTTTTTTAATCTTTTACCATAATAATTTGTTTTGGTAATTTTGGTGTACTCTGAATGTAAAATTACAATTTATCATTACTGTCGAAAATCACTTTTTAATATGCATGTAACAGACACTATAGATCTGTCAGTGAATCAGCTATTTAAATCATAATGTTTTTGTTGTTGCTTCTTCTATGTGCATATATGTCTTAAATAATCATTTTATAGGCTTGAATATTTATTATTATTTCAATAGTCCACCTTTTCATTGACTTTGCATTGCAATGTTACACTAGGTGACAGTATTTTTACAGTCTAATTCTAATCTATCTAATACTGCTTTGAAGGAACAACTATATTTAACA

Function

NR:

description
Myosin VIIa

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_06273065_06297895.mRNA True 6711 mRNA 0.45 44 6273065 6298274

Neighbor

gene id symbol gene type direction distance location
CI01000004_06252342_06268652 SAP130B, SAP130 coding upstream 3910 6252342 ~ 6269155 (+)
CI01000004_06241579_06249282 MLLT1B coding upstream 22308 6241579 ~ 6250757 (+)
CI01000004_06236166_06239572 NA coding upstream 33120 6236166 ~ 6239955 (+)
CI01000004_06156517_06161977 PRRX1A, PRRX1, NOTO, PRRX1B coding upstream 110996 6156329 ~ 6162069 (+)
CI01000004_06081028_06109613 FAM129AB coding upstream 163452 6080811 ~ 6109613 (+)
CI01000004_06398828_06403391 AGXT, AGXTB coding downstream 100358 6398632 ~ 6403645 (+)
CI01000004_06416971_06417931 THAP4 coding downstream 118308 6416582 ~ 6418144 (+)
CI01000004_06424864_06438552 STK25B, STK25, STK25A coding downstream 126310 6424584 ~ 6438672 (+)
CI01000004_06463149_06463918 NA coding downstream 164875 6463149 ~ 6464006 (+)
CI01000004_06466871_06468477 NA coding downstream 168496 6466770 ~ 6468624 (+)
G28263 NA non-coding upstream 53094 6219643 ~ 6219971 (+)
G28258 NA non-coding upstream 80335 6182817 ~ 6192730 (+)
G28254 NA non-coding upstream 91184 6181665 ~ 6181881 (+)
G28244 NA non-coding upstream 99649 6173214 ~ 6173416 (+)
G28255 NA non-coding downstream 11755 6310029 ~ 6311719 (+)
G28288 NA non-coding downstream 51208 6349482 ~ 6349764 (+)
G28293 NA non-coding downstream 71992 6370266 ~ 6396220 (+)
G28308 NA non-coding downstream 115474 6413748 ~ 6414256 (+)
G28309 NA non-coding downstream 127081 6425355 ~ 6441502 (+)
G28165 NA other upstream 540064 5732589 ~ 5733001 (+)
G27805 NA other upstream 899262 5372825 ~ 5373803 (+)
CI01000004_03550525_03552621 PTGER4C other upstream 2720619 3550329 ~ 3553423 (+)
G26245 NA other upstream 2750672 3509017 ~ 3522393 (+)
CI01000004_02745885_02768971 NA other upstream 3514127 2745885 ~ 2769135 (+)
G28302 NA other downstream 171754 6470028 ~ 6502087 (+)
CI01000004_06571261_06572539 SEP15 other downstream 272946 6570771 ~ 6572667 (+)
CI01000004_07654234_07655677 MRPL34 other downstream 1356498 7654234 ~ 7656383 (+)
CI01000004_08414451_08436256 NA other downstream 2135431 8414316 ~ 8439933 (+)
G28859 NA other downstream 2300961 8599235 ~ 8599603 (+)

Expression


Co-expression Network