CI01000004_10630265_10647904


Basic Information

Item Value
gene id CI01000004_10630265_10647904
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 10630265 ~ 10647904 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_10630265_10647904.mRNA
AGTAATTCAGAGGAAGACATTCTTGTGGATGACTGGCTGACATCCAAACAAGATCTCTTGGACACATCAGATGAAGAGCTGAACGATGACCTTTTGCGTAGTGATGATGAGAACGAAACTATGAGTGTTTCTAAACCAAAAGTTCAGGCGATTGCAAAGCCATACCTTGTGTGCAAAACTCCACACCTTGCTGAAGACCAAGCCAGATGTCCTAAAGAAGAGCAGACAGAGGTGGACCCTGGTGAAGTTTTAGACATCGAAATCAATGCTCCCTCTGGAGATGAATTTCAACAGAAAGTTGGTGAATACAGTGACCATCAGCAGGCCAACATAAAGATGGAAGTTAAGGATGATATTAAGGTTTTGTCCAGTTTACACGCAGGAGTTGGATCTGAGTTGCGAGAGGGTCTCTCTCCTCAACCCTCTGGACGTCATCTCGTACACTCCTGCAAGGGACAGCCTGCCCCAGAGGAGACCCGCACCGGACCTTGCCGCAGTCCTGAGCCAGTGTTCCCAGGACAGCATATGTTTGATCAACAACACTCTGCTTCAGTCTTGGACACTAATCCGCTCCTCGCTGGACCTGCTCCCATGGGCTCCATTCATCCTCCAGGATATGAGAGTGACCCCTTGAGGCCCAGTCCAGCTTTGCAGGGGCCCACTCATCTGTCAAAGCCTGGGTCTTCCCACCGTGGGCACTGCTCTCTCCAGAAAAATCCATCAGCTCAGTCTGGCTGTCCCTTCACAGCTCCCTCTAGACCACAGGCACAGAAACCTGCTGTGCTGGTAAGAGCTGTTGCCAGGACGGTGCAGAGTGCCAAGCCAATGGCTGTTGCCAGGGGGATGCCCATTCCTGCAAGGCAGCCAGCAAGTGCCAAGTCTAAGATATCTGCCAAAACTCCACCAGCACCACGGATGGTGGGAAGAAATGTGGGTCAGAGGGTCAAGGTGAAGCCCCATACTCCTCCAGCTACTCAAAAACTTCCTGCAAAGTCCCTAAACATGACAAACAACAAAGAGGAGGAGGAGGAGGAGGTGATCTACAGGCAGAGGCTGCAGGAGCAGATGCGACTAAGGGAGCAGGTTATCAAACATAAGGAACGGATGCGATCTATGCGGACCGTAAACAAGAAGCATCTGCTTCTGGAGCGCTTCCAAACTGATAGCTCCACTGGACACTGGAACAACCAAAATCAACAGAAACAGCCGTGCATCCTGAGTTCTTGCCCTCAGAAGGTTACGCACCAGCAGCCCTTCAATAATCCCCCTCGTTGTCTCGTTCTGGAGCGCCAGCCAGAATTCCATTCGCTGCCTCCACAGCAGCACCAATACCAGCTTTTAGTACCCACACTTCAGCCGCCATGGCAACGAGCTCCACTGGCTGGAGGAAATCCATCAGGCCTTGCAGCAGAGATGCAGCATAATCAGCCTCATCAGTGGGGCACAGACAGGGTGGTGTTACAGGGGATGGAGCAAATCCCAAACCAGATGAACCAACAGTACAGTAATGACAAGGCCCATGCAGCAGATCGGCAGGCAGTTCAGCAAGGAGGCAAGAGGATGTTAGAGCAGAGAACTTCTGAGGGGCCTGTTCCCAACAAAATGACAATGGTCAGACACTTCAGC

Function

NR:

description
hypothetical protein cypCar_00019554

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_10630265_10647904.mRNA True 1626 mRNA 0.52 8 10630265 10647904

Neighbor

gene id symbol gene type direction distance location
CI01000004_10610634_10613290 ENG2B coding upstream 16635 10609780 ~ 10613630 (+)
CI01000004_10582152_10586349 HTR5AB, HTR5A, HTR5AA coding upstream 43712 10582121 ~ 10586553 (+)
CI01000004_10514814_10550774 NA coding upstream 79345 10514814 ~ 10550920 (+)
CI01000004_10434104_10435287 PTF1A coding upstream 194696 10431833 ~ 10435569 (+)
CI01000004_10376389_10423302 DLGAP1A, DLGAP1 coding upstream 206963 10376389 ~ 10423302 (+)
CI01000004_10683400_10692323 NA coding downstream 35496 10683400 ~ 10692565 (+)
CI01000004_10712377_10730563 KCNB2 coding downstream 64473 10712377 ~ 10730563 (+)
CI01000004_10736615_10738593 RDH10, RDH10B coding downstream 88711 10736615 ~ 10739026 (+)
CI01000004_10767883_10769627 TMEM70 coding downstream 119979 10767883 ~ 10769753 (+)
CI01000004_10827227_10829982 PI15B, PI15 coding downstream 179058 10826962 ~ 10831024 (+)
G30787 NA non-coding upstream 155314 10474750 ~ 10474951 (+)
G30780 NA non-coding upstream 176005 10453602 ~ 10454260 (+)
G30688 NA non-coding upstream 182528 10436230 ~ 10447737 (+)
G30681 NA non-coding upstream 285287 10208466 ~ 10344978 (+)
G30689 NA non-coding downstream 46013 10693917 ~ 10697207 (+)
G30839 NA non-coding downstream 53320 10701224 ~ 10701436 (+)
G30678 NA non-coding downstream 84483 10732387 ~ 10736123 (+)
G30861 NA non-coding downstream 102930 10750834 ~ 10751295 (+)
G30863 NA non-coding downstream 106053 10753957 ~ 10754306 (+)
G30797 NA other upstream 132477 10497376 ~ 10497788 (+)
CI01000004_08976512_08980033 TTPA other upstream 1649281 8976254 ~ 8980984 (+)
G28859 NA other upstream 2030662 8599235 ~ 8599603 (+)
CI01000004_08414451_08436256 NA other upstream 2179038 8414316 ~ 8439933 (+)
CI01000004_07654234_07655677 MRPL34 other upstream 2973882 7654234 ~ 7656383 (+)
G31710 NA other downstream 989347 11637251 ~ 11642400 (+)
CI01000004_11666900_11667179 NA other downstream 1016869 11666900 ~ 11667659 (+)
G31865 NA other downstream 1544226 12192130 ~ 12197418 (+)
CI01000004_12646972_12652534 NA other downstream 1994850 12646838 ~ 12652570 (+)
CI01000004_14036114_14036449 KIAA0040 other downstream 3375643 14035393 ~ 14039142 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location