G30839


Basic Information

Item Value
gene id G30839
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 10701224 ~ 10701436 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU34864
TGCAAATGAAAAATAAACAAGAGGAGGTCAGTTATGTTAGTTTGTTTAGTCTTGTTTAGACTTGTTTAGTCTGTAAAGCTGTCTGTGAAGATGAAGTACTTATGTAGAGGTGTCTGGTTGGCCCCATCAGTGATGTTGATAAGGTCACACACTTTATGGTAAGCTGAGAGCATGACTTTAACAACCTCAATGGCACCTTGACTACATGCAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU34864 True 213 lncRNA 0.39 1 10701224 10701436

Neighbor

gene id symbol gene type direction distance location
CI01000004_10683400_10692323 NA coding upstream 8659 10683400 ~ 10692565 (+)
CI01000004_10630265_10647904 NA coding upstream 53320 10630265 ~ 10647904 (+)
CI01000004_10610634_10613290 ENG2B coding upstream 87594 10609780 ~ 10613630 (+)
CI01000004_10582152_10586349 HTR5AB, HTR5A, HTR5AA coding upstream 114671 10582121 ~ 10586553 (+)
CI01000004_10514814_10550774 NA coding upstream 150304 10514814 ~ 10550920 (+)
CI01000004_10712377_10730563 KCNB2 coding downstream 10941 10712377 ~ 10730563 (+)
CI01000004_10736615_10738593 RDH10, RDH10B coding downstream 35179 10736615 ~ 10739026 (+)
CI01000004_10767883_10769627 TMEM70 coding downstream 66447 10767883 ~ 10769753 (+)
CI01000004_10827227_10829982 PI15B, PI15 coding downstream 125526 10826962 ~ 10831024 (+)
CI01000004_10835420_10847343 CRISPLD1B coding downstream 133984 10835420 ~ 10847343 (+)
G30689 NA non-coding upstream 4017 10693917 ~ 10697207 (+)
G30787 NA non-coding upstream 226273 10474750 ~ 10474951 (+)
G30780 NA non-coding upstream 246964 10453602 ~ 10454260 (+)
G30688 NA non-coding upstream 253487 10436230 ~ 10447737 (+)
CI01000004_10434104_10435287 PTF1A non-coding upstream 267911 10431833 ~ 10435569 (+)
G30678 NA non-coding downstream 30951 10732387 ~ 10736123 (+)
G30861 NA non-coding downstream 49398 10750834 ~ 10751295 (+)
G30863 NA non-coding downstream 52521 10753957 ~ 10754306 (+)
G30864 NA non-coding downstream 53816 10755252 ~ 10755575 (+)
G30870 NA non-coding downstream 60378 10761814 ~ 10763042 (+)
G30797 NA other upstream 203436 10497376 ~ 10497788 (+)
CI01000004_08976512_08980033 TTPA other upstream 1720240 8976254 ~ 8980984 (+)
G28859 NA other upstream 2101621 8599235 ~ 8599603 (+)
CI01000004_08414451_08436256 NA other upstream 2249997 8414316 ~ 8439933 (+)
CI01000004_07654234_07655677 MRPL34 other upstream 3044841 7654234 ~ 7656383 (+)
G31710 NA other downstream 935815 11637251 ~ 11642400 (+)
CI01000004_11666900_11667179 NA other downstream 963337 11666900 ~ 11667659 (+)
G31865 NA other downstream 1490694 12192130 ~ 12197418 (+)
CI01000004_12646972_12652534 NA other downstream 1941318 12646838 ~ 12652570 (+)
CI01000004_14036114_14036449 KIAA0040 other downstream 3322111 14035393 ~ 14039142 (+)

Expression


Co-expression Network