CI01000004_15911104_15915972


Basic Information

Item Value
gene id CI01000004_15911104_15915972
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 15910936 ~ 15916019 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_15911104_15915972.mRNA
TGAATTGTGGAAAAATCACGGGAGTAATCTGAGTGTCTGAAAAACAAATGAAAAGCAAGAAAATGGCCGTTCTGCTGCTGGTGCTGCTGCTCTGTGCTGGGAGCTCAATTGCTCAAGATTTGTTGATACGAACTGTGAACATTATTGCTGAGCTCGAGAAGCTAAATCACGTGGATGAAAGGATACAAAAACTAGAAGAAACACTGACCAAAGTATTGAGTGAGATTGAAGGCAAAAAGGTTGCTTTCTCAGCTGGACTTCTGGCTTCTGAAAAGGCCCAAATTGGGCCCTTTGCTGATACCAGAATTCTGGAATACAAAAAAGTCTTTAGTAATGTTGGAAATGCCTATGACTCAAATACTGGTATTTTCACAGCACCAGTAAAAGGAGTCTATTACTTCAGATTTTACGGTCATTGTCATGGTGGAACCACAATGGCGGTCAATCTCTTGAAGAATGGTGAAAGCCAGTGCTCTGTGTATTCTGCGCTCCCAGCTAGCAGTGGTAATGCCAGCAATGGTGTCGTTCTCACACTGGAGATCGGTGATCAGATTTATACACAACTTTGGAGGAACAGCTGGGTTTATGATGATGCAGGAAGTTTCACTAGCTTCACTGGCTTTCTGATTTTCCCCTTGTGAGCGTCTGAATCTTATCCTATCCAGTTCCAGATAATTGTTCCTGTGTAAGTGAACTGTATCTGAGTAAATAAGAGCAAATAGGAACAACAAAAGGGAGATCATTGTGTATGCTTCTTAGTTACGATATGTTTAAGTCTGGAGTACTTCTTTCTTAAGTCTGAAAATAAA

Function

NR:

description
Si:rp71-1g18.11 protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_15911104_15915972.mRNA True 809 mRNA 0.41 3 15910936 15916019

Neighbor

gene id symbol gene type direction distance location
CI01000004_15881212_15881809 NA coding downstream 27244 15880140 ~ 15883692 (-)
CI01000004_15836936_15841048 NA coding downstream 69888 15836462 ~ 15841829 (-)
CI01000004_15832789_15836192 NA coding downstream 74732 15832573 ~ 15836231 (-)
CI01000004_15827737_15828938 NA coding downstream 81976 15827668 ~ 15828960 (-)
CI01000004_15760841_15761919 HBL4 coding downstream 148949 15760790 ~ 15761987 (-)
CI01000004_15922924_15923872 NA coding upstream 6707 15922726 ~ 15923872 (-)
CI01000004_15956601_15962195 TOX4 coding upstream 39981 15956000 ~ 15962930 (-)
CI01000004_15965178_15990162 CHD8 coding upstream 49101 15965120 ~ 15990175 (-)
CI01000004_15991836_15995032 CBLN12, CBLN3, CBLN1 coding upstream 75621 15991640 ~ 15995184 (-)
CI01000004_15999644_16005705 NA coding upstream 83476 15999495 ~ 16006425 (-)
G34616 NA non-coding downstream 265 15906913 ~ 15910671 (-)
G34801 NA non-coding downstream 23523 15887137 ~ 15887413 (-)
G34799 NA non-coding downstream 33186 15877268 ~ 15877750 (-)
G34794 NA non-coding downstream 59068 15851264 ~ 15851868 (-)
G34811 NA non-coding upstream 9991 15926010 ~ 15926261 (-)
G34814 NA non-coding upstream 12424 15928443 ~ 15928750 (-)
G34583 NA non-coding upstream 14356 15930375 ~ 15944664 (-)
G34830 NA non-coding upstream 82800 15998819 ~ 15999147 (-)
G34836 NA non-coding upstream 103539 16019558 ~ 16023123 (-)
G34796 NA other downstream 47188 15860613 ~ 15863748 (-)
G34633 NA other downstream 123039 15787386 ~ 15787897 (-)
G34718 NA other downstream 629287 15281016 ~ 15281649 (-)
CI01000004_15086759_15087492 NA other downstream 820578 15086671 ~ 15087575 (-)
G34934 NA other upstream 485726 16401745 ~ 16421506 (-)
G34982 NA other upstream 586706 16502725 ~ 16515974 (-)
G34995 NA other upstream 613423 16529442 ~ 16533008 (-)
G34999 NA other upstream 621176 16537195 ~ 16541278 (-)
CI01000004_16596848_16599652 NA other upstream 662648 16596476 ~ 16601205 (-)

Expression


Co-expression Network