CI01000004_16596848_16599652


Basic Information

Item Value
gene id CI01000004_16596848_16599652
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 16596476 ~ 16601205 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_16596848_16599652.mRNA
AAAAGCTGAGTCACAGCAGCAAGGTTAATATAGATGACTCACAAGTGTGAGACACAGAGGTGGACCACAGGGGACAAAATACCTGTTGAATTATGGGATCTGTACTGGAATTACTGTATTAAAGTTCCTCATACATTTTATTCCTATTTTTCCACCATTTTCTATTATTCTCACAGCGTTTAAAGTTGGCATGAAATGAAAATTCACTCTGTCTGTTTTCTAAATGCATGGATAAATTGTTAACAGTTAACATGCATGTCTTATTTTTTGCATTTATTTTGACCTCGTAATTTTTAATCTAAATGTCATAACTCAATCTTTTGGTGAAACTTTCTGGTGACGTATGCCGAACTTCTCCAATCACTTTAATCTGCTTAAACCCCACCTCTTAATTTCAATTGACTGAAATCTCCATCCAATAAACAACCGATGGATAGCACCAAGACCCCGCCGTACATTTTTTTTGTTATTTTAATATGTATATCAGTCAGATGTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTCTGTTGCTACTTCCACTTTATCACGACTTTAACATGCACACTCCATTTGTTACTTTGATTTATTGAGAATTTCAGCCTTGGCAGTGCATCTATTTTTATATATTTTTTTTTTCTCACAAGTACAGCAGCATGACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAAACTAGTTTGCTCCCATTATAATATGGAGCTCCCAGCACTGAAAACTCTTGATATTGATATAGTGTGCCCCATTTCTATTTTTGACACACTGCAAAGCTTCAGACAATAATTTCCTCTCTTATACTTACTCATATACGGATACAGTAAAAATATAGTAAAAACAGAAATATTGTGAAAATATAATTACAATTCAAAATAGCTGTTTTTAATTTTAATATATTTTAAAATGTAATTTATTCTTGAATTTTCAGCATCATTACTCCAGTCTTCAGTGTCACATGATCCTTCAGAAATCATTGTAATATGATGATTTGCTGCTCAAAAACGTTCTTATTATTACCAGTTGAGCTGTTTAATACATGATTTATGGAAACCATGATACATTTTTCGGTATTTTTTGATGAATAGAAAGTTCAAAAGAACAGAATTTATTTTAAATAGAAATCTTTAGTAAAATTATAAACATCTTTACTGTCTTTTTTTGACCAATTTAAGGCCTCTTTGCTGATAAACGTATAATACAATCTTACTGGACCCAATTTTTGAATGGTAGCGTATCATGAATTAATTTCTATTCAAATTTTATTTATTAATTTCAAAATATTTTGATACTAATCACTAATATCTTCATTCTGAATTCCAATTGGTCTTTTTATATTGCACATTACTATCAGTCACTCTTTCTCCCTCTCTCCTTTCTCTGTATTTCTGTCTCTGTATTTTTATTTACAATGTTTAATTTACTGTAAAACGCTATTCTTTCTTTTGACCTAAAACCCTATTCTTTTAATTCCCTGCATGTAATCTCCGCCAGCTATGAATTATGGGATCCGTGCTCAAGGACAGAGATTAAAAACAGGCCTACCCTCTGTGCTGATCTCACGGGAGCGCACAAGGTCACTCTTGTTGCCCACTAGGATGATGGGGGTGTGCGGCAGCGACTCCCTCAACAGCAGGCGAAGCTGGGCGATCCGGTGGAAGCTTCGCCTATCCGTCAACGAGAACACCAGGATGCATACCTCACATTGCAGAGGATTAGCAGGATTTAAGGAGGATAACCTCAAATCTACGATGGCTTTGTTGTTGTTCCAGCTCACAATTTTCCCGTTGCTGCTGCCGCCACTGAGCTCAGGCAAATTCCAGCCCTCTGGAGAGCACCTAAAAAATTCTCATTGCAGCCGAGCCAATTGCACTCAGCCCCGGAGGGTGAGATTCACACAGCCTCAGAAACGCAGAGTTCCTCTGGAGAGGAAGAGTCTATTGGGGCGGAAGCAAGGGGGGGAGAGGGGGGTTCGGCCACCTGCCACAACCCCACACAGGAAGGGCATGGGGAGGAGGTTCTCTCTTTCGAGGAGCGCACACATGCTCTTGATGAGCGGAGAAGACAGCACGACATGGTCGATAGTGCTCATCGTGATGGAAGGGCTCTCTGGGGCCGGACGGGCAAAGTGAAAGGTCTTTCCATCAGAGAAACAAGACGAGAGCGTAGAGCAGTATCTGACTAACAACATCGAGCTCTTCCACCGAAATACAGGCCCATCTGTCACTGTCTGCCCTTTCATGACCGGATATACAAACAAAATGATAGCTTTTAATGGCTCTGAGTACACACAGGCAGGTATGCTTGCAAAAATGTATAGCCTACAGTGGTAATGCAACACACACATACACACTTATTATGCTGTTCTTTATCACACAAATTGAGTGATTACGGTCATGAAACACACACACACAAAATCCGTATCATGCTGTCAGCAAATATGCCTGCCAGCTTTTTGTCCTCTTGTGCAGATTTAGATTATTAAATCCTGCACTCTTAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_16596848_16599652.mRNA False 2561 mRNA 0.39 3 16596476 16601205

Neighbor

gene id symbol gene type direction distance location
CI01000004_16459173_16459658 NA coding downstream 135145 16458970 ~ 16461331 (-)
CI01000004_16455194_16455607 NA coding downstream 140506 16455097 ~ 16455970 (-)
CI01000004_16449696_16450112 NA coding downstream 146228 16448416 ~ 16450248 (-)
CI01000004_16202928_16216455 PRMT5 coding downstream 379716 16202850 ~ 16216760 (-)
CI01000004_16183581_16194877 SLC7A8A, SLC7A8B, SLC7A8 coding downstream 401599 16183022 ~ 16194877 (-)
CI01000004_16626200_16639382 COPB2 coding upstream 24731 16625936 ~ 16639382 (-)
CI01000004_16641559_16646208 RBP2B coding upstream 40197 16641402 ~ 16646239 (-)
CI01000004_16654485_16672242 RBP1 coding upstream 53243 16654448 ~ 16672310 (-)
CI01000004_16676283_16687164 NA coding upstream 74782 16675987 ~ 16687690 (-)
CI01000004_16951444_16952520 NA coding upstream 349898 16951103 ~ 16952745 (-)
G34915 NA non-coding downstream 20288 16564490 ~ 16576188 (-)
G35007 NA non-coding downstream 35700 16560548 ~ 16560776 (-)
G34995 NA non-coding downstream 63468 16529442 ~ 16533008 (-)
G34963 NA non-coding downstream 123187 16473061 ~ 16473289 (-)
G34952 NA non-coding downstream 151946 16444293 ~ 16444530 (-)
CI01000004_16596848_16599652 NA non-coding upstream 10604 16596476 ~ 16601205 (-)
G35071 NA non-coding upstream 148698 16749903 ~ 16782525 (-)
G35097 NA non-coding upstream 207406 16808611 ~ 16813559 (-)
G35111 NA non-coding upstream 247683 16848888 ~ 16851285 (-)
G35117 NA non-coding upstream 290129 16891334 ~ 16892563 (-)
G34999 NA other downstream 55198 16537195 ~ 16541278 (-)
G34982 NA other downstream 80502 16502725 ~ 16515974 (-)
G34934 NA other downstream 174970 16401745 ~ 16421506 (-)
G34796 NA other downstream 732728 15860613 ~ 15863748 (-)
G35053 NA other upstream 94566 16695771 ~ 16895093 (-)
G35137 NA other upstream 459017 17060222 ~ 17060790 (-)
CI01000004_17313828_17315129 HIGD1A other upstream 711808 17313013 ~ 17315727 (-)
CI01000004_16972324_17046706 NA non-coding upstream 356635 16972247 ~ 17046706 (-)

Expression


Co-expression Network