CI01000004_16951444_16952520


Basic Information

Item Value
gene id CI01000004_16951444_16952520
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 16951103 ~ 16952745 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_16951444_16952520.mRNA
ACACGTGATTATCTGCAAAACAATTTTTTTTATTTTCTTTCTTTCCTCATAAAATTTGTCATGAGTTAAACATCAATCCAGAAGGGATATATCAGAGCTGCAGGAATTTCTGCATCTAAAACAACTGTAAGTGTCTGGTGCAGGGACCTTCAACCGAAGCCCAATAATATTAATTTCCTCACTGACAGCTGCAGTTCTCCACTTATAGATTCTCTTCAGGTAAAGATGTCCTGCACCATTCTGTATCCGCTGCTGCTTCTCCTGTTCAGCTGTGCCTGTCTGTCTGAGGTCCAGCAGGAAGAGAAGGGAGTACTGACTGAGAGTCCTTTGAATGAAGAGGAAAGCGGTGCTGTTTTGACTTCTGGTGAGTTTCAGCAACGCTTTCTCACAGGGATCTACTCTGAGCTGGCAGAGCTGAGATCAACTGTGAGATCTCTGAAGAACAGACTGGAGGTCACTGAGGAGCAGATCAGGAAAAAAGAATATAAAGTGGCATTTGCCGCCACACTTGGACCCATTGGTAACCTTGGACCTTTTAACACTGAGATCACTCTGATTTACCAAGATGTGTTTGTGAATGAAGGAAGAGCTTACAACCCAACCACTGGTATCTTCACAGCACCTGTTAAAGGTGTCTATTTCTTCATTATCACTGGACATAACCGCTCATCTAGAAGTATGGGTCTAAGACTCTTTAAAAATGGACAACAGATGATAACAATTTACAATCATGCTCTAGGTGACCGCTATGACACAGGATCTAATTCAATCTCTTTGACTCTAGAGGAAGGAGATCATGTCTATGTGCGTCTCCGGGAAAATACATGGGTCTTTGATAATGTAAATGACCACACTTCATTTGTTGGCCATTTACTTTATTCTCTTTGATGGTCTTCAATGAACATCATCTTATGAGGCTAAAGTCTTAATGTTTGTTGAGTCATATTTCATGTTATTTGGTAGTTCTATTAAAATGAACTGCTTGGAAAATTTAAACTTTTTTAAAGAAACTTAATTTGTGCTTTTAGCTTTCATCGTCTCTTACAATAGACTTACAGTAATTATTGTCATTACTGGCCAGTGTCCTTCATATTTTTACTGAACAATATGAAATGTTATGATTACATGATAAGCACATTTTGCAACACAGTTTCATTTTTGTATATAATATCCAGTTTGTATTTGTTATTATGTGCATACCTTTGTTAAATATCCCCACTGTTAATAAA

Function

NR:

description
LOC560655 protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_16951444_16952520.mRNA True 1229 mRNA 0.38 3 16951103 16952745

Neighbor

gene id symbol gene type direction distance location
CI01000004_16676283_16687164 NA coding downstream 263413 16675987 ~ 16687690 (-)
CI01000004_16654485_16672242 RBP1 coding downstream 278793 16654448 ~ 16672310 (-)
CI01000004_16641559_16646208 RBP2B coding downstream 304864 16641402 ~ 16646239 (-)
CI01000004_16626200_16639382 COPB2 coding downstream 311721 16625936 ~ 16639382 (-)
CI01000004_16596848_16599652 NA coding downstream 349898 16596476 ~ 16601205 (-)
CI01000004_16954912_16955958 NA coding upstream 2062 16954807 ~ 16956268 (-)
CI01000004_16960069_16965947 NA coding upstream 6654 16959399 ~ 16966294 (-)
CI01000004_16972324_17046706 NA coding upstream 19502 16972247 ~ 17046706 (-)
CI01000004_17122103_17127335 MYL4, MYL3, MYL13 coding upstream 168915 17121660 ~ 17127335 (-)
CI01000004_17265394_17279344 TMIE coding upstream 312475 17265220 ~ 17281002 (-)
G35117 NA non-coding downstream 58540 16891334 ~ 16892563 (-)
G35111 NA non-coding downstream 99818 16848888 ~ 16851285 (-)
G35097 NA non-coding downstream 137544 16808611 ~ 16813559 (-)
G35071 NA non-coding downstream 168578 16749903 ~ 16782525 (-)
G35089 NA non-coding upstream 60695 17013440 ~ 17025152 (-)
G35124 NA non-coding upstream 98253 17050998 ~ 17051240 (-)
G35125 NA non-coding upstream 98804 17051549 ~ 17052637 (-)
G35129 NA non-coding upstream 100251 17052996 ~ 17093838 (-)
G35053 NA other downstream 56010 16695771 ~ 16895093 (-)
G34999 NA other downstream 409825 16537195 ~ 16541278 (-)
G34995 NA other downstream 418095 16529442 ~ 16533008 (-)
G34982 NA other downstream 435129 16502725 ~ 16515974 (-)
G35137 NA other upstream 107477 17060222 ~ 17060790 (-)
CI01000004_17313828_17315129 HIGD1A other upstream 360268 17313013 ~ 17315727 (-)

Expression


Co-expression Network