G35125


Basic Information

Item Value
gene id G35125
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 17051549 ~ 17052637 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU39892
CCATCATCCTTCTAAATTTCAGTTGTGAAATATTCTTCTCAGGGTGAACATCAGGGTTTATAGTGATGATCAGGATCAGTAAGTACACTTAGTGACTGCTTATTGAGCATCTTCCTACTTGCTGGTTGCTCAGTTTCTGAACTGCTTATGGGTTTCAACGAAGCAGGGTGTGTGATGTCATGGGGTGTTAGTTAAAAAGCACTGCTGAACAGAAAACCCTTTTAGTGAATGAGAAACCATATGCCCCTGTAAGCAACTTTCTTGTGTCAGTTTGATTGTCTGATGCAATAAATGATGACTTTCTTTAAATAAATTATTTAGCTCACATGAATGTCCAATTTGGAGAATGGTTTGATGATCAGAGATGCGGTCACTCCAATACATTTGTTCCAGGGCATGCTATAAATTTCCTCCTGATATTTCCACACAGAGTTCAAACAGAAACCCTTGAGGAGTCTGTATGCAGTTTCATGTTCTCAAAGAGCAAAAGAAGCCCGGGCTGAGCTACAGAGATGGAGCGTTACATCATTGTCGCATAATTTAGAGGATCAAACACTTGCAAATCTACAAGTGATCAGAGAGCATTCTTTAGACCCCTGCAGCAGTGTTCTTCTCTCACTTCTGTACCCTGAAACCACTGACTTCACATCTTCTTAGATTTTGACATGGTTCATGATTTTGTCTTTAATTATGTTATATCTTTTATTTTGAAGTCCATTCTTGTACATAGTCTTAGTTTCCTGCACCTCATGTCCCTTTTTTCTGCCTTGATTTATCGCAGATGTTAATGATTCACTAATTAGTTCAGGTGTATTTATAGCCATGTTTCCATAATATGTAACAAATATCCACCGCAGGTAAGTTGAAGTGAACCTACAATACCAGTCAAAAGTTTCCTGTCAGCTGTATCATGAAATAGTTCATCACTCTAAGCTTTTTAGTACAACACTGACGACATCTTGTGGTCAAAAAGTGGACAAGCAGCCTTTATGTCCCAGAGGTCCCTGACATTTTTGATTGTTTCATATAATAAATCAGTCACTTTGTACTCAGAGACCATAAAGGCAATAAAAAGTGTCAGTGTTGATG
>TU39894
TTTTGAAGTCCATTCTTGTACATAGTCTTAGTTTCCTGCACCTCATGTCCCTTTTTTCTGCCTTGATTTATCGCAGATGTTAATGATTCACTAATTAGTTCAGGTGTATTTATAGCCATGTTTCCATAATATGTAACAAATATCCACCGCAGGTAAGTTGAAGTGAACCTACAATACCAGTCAAAAGTTTCCTGTCAGCTGTATCATGAAATAGTTCATCACTCTAAGCTTTTTAGTACAACACTGACGACATCTTGTGGTCAAAAAGTGGACAAGCAGCCTTTATGTCCCAGAGGTCCCTGACATTTTTGATTGTTTCATATAATAAATCAGTCACTTTGTACTCAGAGACCATAAAGGCAATAAAAAGTGTCAGTGTTGATG
>TU39893
CCATCATCCTTCTAAATTTCAGTTGTGAAATATTCTTCTCAGGGTGAACATCAGGGTTTATAGTGATGATCAGGATCAGTAAGTACACTTAGTGACTGCTTATTGAGCATCTTCCTACTTGCTGGTTGCTCAGTTTCTGAACTGCTTATGGGTTTCAACGAAGCAGGGTGTGTGATGTCATGGGGTGTTAGTTAAAAAGCACTGCTGAACAGAAAACCCTTTTAGTGAATGAGAAACCATATGCCCCTGTAAGCAACTTTCTTGTGTCAGTTTGATTGTCTGATGCAATAAATGATGACTTTCTTTAAATAAATTATTTAGCTCACATGAATGTCCAATTTGGAGAATGGTTTGATGATCAGAGATGCGGTCACTCCAATACATTTGTTCCAGGGCATGCTATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU39892 False 1089 lncRNA 0.38 1 17051549 17052637
TU39894 False 384 lncRNA 0.42 1 17051549 17051932
TU39893 True 406 lncRNA 0.39 1 17052232 17052637

Neighbor

gene id symbol gene type direction distance location
CI01000004_16972324_17046706 NA coding downstream 4843 16972247 ~ 17046706 (-)
CI01000004_16960069_16965947 NA coding downstream 85255 16959399 ~ 16966294 (-)
CI01000004_16954912_16955958 NA coding downstream 95281 16954807 ~ 16956268 (-)
CI01000004_16951444_16952520 NA coding downstream 98804 16951103 ~ 16952745 (-)
CI01000004_16676283_16687164 NA coding downstream 363859 16675987 ~ 16687690 (-)
CI01000004_17122103_17127335 MYL4, MYL3, MYL13 coding upstream 69023 17121660 ~ 17127335 (-)
CI01000004_17265394_17279344 TMIE coding upstream 212583 17265220 ~ 17281002 (-)
CI01000004_17292926_17304823 CCDC13 coding upstream 238449 17291086 ~ 17304823 (-)
CI01000004_17313828_17315129 HIGD1A coding upstream 261034 17313013 ~ 17315727 (-)
CI01000004_17329122_17345386 DSPA, DSP coding upstream 275529 17328166 ~ 17345386 (-)
G35124 NA non-coding downstream 309 17050998 ~ 17051240 (-)
G35089 NA non-coding downstream 26397 17013440 ~ 17025152 (-)
G35117 NA non-coding downstream 158986 16891334 ~ 16892563 (-)
G35111 NA non-coding downstream 200264 16848888 ~ 16851285 (-)
G35129 NA non-coding upstream 359 17052996 ~ 17093838 (-)
G35180 NA non-coding upstream 86798 17139435 ~ 17139640 (-)
G35314 NA non-coding upstream 193599 17246236 ~ 17246673 (-)
G35321 NA non-coding upstream 201155 17253792 ~ 17254000 (-)
G35340 NA non-coding upstream 249615 17302252 ~ 17302565 (-)
G35053 NA other downstream 156456 16695771 ~ 16895093 (-)
CI01000004_16596848_16599652 NA other downstream 433935 16596476 ~ 16601205 (-)
G34999 NA other downstream 510271 16537195 ~ 16541278 (-)
G34995 NA other downstream 518541 16529442 ~ 16533008 (-)
G34982 NA other downstream 535575 16502725 ~ 16515974 (-)
G35137 NA other upstream 7585 17060222 ~ 17060790 (-)

Expression


Co-expression Network