CI01000004_16183581_16194877 (SLC7A8A, SLC7A8B, SLC7A8)


Basic Information

Item Value
gene id CI01000004_16183581_16194877
gene name SLC7A8A, SLC7A8B, SLC7A8
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 16183022 ~ 16194877 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_16183581_16194877.mRNA
GTAACATTATTGGGTCTGGGATCTTTGTAAGTCCAAAGGGTGTATTGGAAAATGCCAGTTCAGTGGGTCTGGCTCTCATAGTGTGGATTCTCACGGGCGTCTTCACTGCCATCAGTGCTCTGTGCTATGCTGAACTGGGAGTCACAATCCCAAAGTCGGGCGGAGACTATTCCTATGTTAAGGACATTTTTGGAGGGCTAGCTGGGTTTCTAAGGCTGTGGATTGCAGTGTTGGTGATCTATCCAACTAACCAGGCTGTGATTGCCCTCACGTTTGCCAATTACGCACTGCATCCTCTCTTCCCTTCATGCTTCCCTCCAGAGAGAGCTCTGGGTCTGCTCGCTGCCATCTGCCTGTTGCTGTTAACTTGGATCAACTGCTTCAGTGTCCGCTGGGCGACGCATGTACAGGATGTGTTCACCACAGGCAAGCTCCTCGCCCTCTGCCTCATCATCGTTATGGGCATCGTGCAGATCTGCAAGGGTCATTTTTATTGGTTGGAGCCAGAACATGCATTTCAGCCTTTCCAGCCCTATGACATGGGCCGCATTGCACTCGCTTTCCTCCAGGGCTCCTTCGCTTATGCAGGCTGGAACTTTCTTAACTATGTAACAGAAGAGCTCGTCGACCCCTACAGGAATCTGCCTCGTGCAATCTTCATCTCAATCCCTCTGGTCACTTTTGTCTATGTATTTGCGAATATTGCGTATGTTACAGCTATGAGCCCTCAGGAACTGCTGGCCTCCAATGCTGTTGCTGTGACGTTTGGTGAAAAGCTGCTCGGGGTGATGTCATGGATCATGCCCGTCTCTGTGGCTCTTTCCACCTTCGGAGGGGTCAACGGTTCCCTTTTCACGTCATCTAGGTCAATCTTAAAGTTTTATTTCTCATTTGCTCCTCCTGCATTGCATTTTCAGCATTATCAGTGTTTATCAACTCTGCTGATGTTGTGCACCAGCGACATATACACCCTCATCAACTATGCTGGTTTCATCAACTACCTGTTTTATGGAGTCACTGTTGCCGGGCAGATTGTGCTTCGCATCAAAGAGCCAGACATACATCGGCCAATCAAGGTGAGCTTGGCATGGCCAGTAATTTTCCTGATTTTCTGGGCATTCCTGCTGATCTTCTCTCTGTACTCGGAGCCTCTGGTGTGCGGCATCGGTCTGGCCATCATGTTGTCAGGTGTTCCTGTGTATCTATGTGGCGTATATTGGGAAAACAAGCCCAAGAGCTTCAGATCTTTTGTTGCTAAAGTGACACACTTGGGGCAGAAGCTGTGCATGGCGGTTTATCCCACTGAGGAGGACAGAGGTGGAAATGAAGACAAAGAGGAAGCTAGATAGGATTACATGAAGTAACTTTATCCATTGATGGATTATTATTCAACAGCTAATCTTAAGCAATATGAGTTTGGTAGGTTTTGAAAATGCAAAACAAACAGGCACACAACTGTGGAGAGTAATTTAATAATTTAAAAGTATTTCTTTTCATTTGTAAGACTGGCCTTAAGAAATGTCCTTGGTGCAATACTGCCACCCACTGGCAAGATTATTAGACGCAATATAAATATTGGGTTATAACAACACTTGTTGTTATAGCATACTTCCACAAATAATTACTGAGTAATATTAATTAACTACATGTACTTACTATACGGTTGAGGTTTAGTTTAGATTTAGTTGATTGTAATTATGCATCAATTACTGTACTATAGTAAATGCTTGTAACTTCAGTAACTCACCTTAAAATAAAGAGTTACCAAATATTGTTGCTGCCACTGATACAGAGAATTTTGTATTTTTATATTGAGCATATTATTTGATGTTTTCTTGATCATTGTCTAGTGTTTGTATTCCCTAAATTACTATTTTAAAATTGCTGAATTATTGTGGTGAAAATAAA

Function

symbol description
slc7a8b Predicted to enable L-amino acid transmembrane transporter activity and neutral amino acid transmembrane transporter activity. Predicted to be involved in amino acid transmembrane transport and neutral amino acid transport. Predicted to act upstream of or within amino acid transport and transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human SLC7A8 (solute carrier family 7 member 8).
slc7a8a Predicted to enable L-amino acid transmembrane transporter activity and neutral amino acid transmembrane transporter activity. Predicted to be involved in amino acid transmembrane transport and neutral amino acid transport. Predicted to act upstream of or within amino acid transport and transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human SLC7A8 (solute carrier family 7 member 8).
slc7a8 Enables several functions, including neutral amino acid transmembrane transporter activity; thyroid hormone transmembrane transporter activity; and toxin transmembrane transporter activity. Involved in L-alanine import across plasma membrane; L-leucine import across plasma membrane; and thyroid hormone transport. Located in plasma membrane. Part of basolateral plasma membrane and microvillus membrane.

GO:

id name namespace
GO:0015175 neutral amino acid transmembrane transporter activity molecular_function

KEGG:

id description
K13781 SLC7A8, LAT2; solute carrier family 7 (L-type amino acid transporter), member 8

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_16183581_16194877.mRNA True 1908 mRNA 0.43 9 16183022 16194877

Neighbor

gene id symbol gene type direction distance location
CI01000004_16160899_16178772 AP1G2 coding downstream 3878 16160357 ~ 16179144 (-)
CI01000004_16155534_16158067 NA coding downstream 24955 16155372 ~ 16158067 (-)
CI01000004_16152238_16154327 NA coding downstream 28695 16151733 ~ 16154327 (-)
CI01000004_16146406_16149756 NA coding downstream 33266 16146076 ~ 16149756 (-)
CI01000004_16092821_16115520 NA coding downstream 67492 16092706 ~ 16115530 (-)
CI01000004_16202928_16216455 PRMT5 coding upstream 7973 16202850 ~ 16216760 (-)
CI01000004_16449696_16450112 NA coding upstream 253539 16448416 ~ 16450248 (-)
CI01000004_16455194_16455607 NA coding upstream 260220 16455097 ~ 16455970 (-)
CI01000004_16459173_16459658 NA coding upstream 264093 16458970 ~ 16461331 (-)
CI01000004_16596848_16599652 NA coding upstream 401599 16596476 ~ 16601205 (-)
G34639 NA non-coding downstream 46326 16123560 ~ 16136696 (-)
G34837 NA non-coding downstream 158241 16023244 ~ 16024781 (-)
G34836 NA non-coding downstream 159899 16019558 ~ 16023123 (-)
G34830 NA non-coding downstream 183875 15998819 ~ 15999147 (-)
G34866 NA non-coding upstream 38434 16233311 ~ 16233711 (-)
G34867 NA non-coding upstream 38955 16233832 ~ 16234289 (-)
G34868 NA non-coding upstream 41480 16236357 ~ 16236643 (-)
G34869 NA non-coding upstream 42013 16236890 ~ 16302100 (-)
G34950 NA non-coding upstream 240098 16434975 ~ 16442439 (-)
G34796 NA other downstream 319274 15860613 ~ 15863748 (-)
CI01000004_15832789_15836192 NA other downstream 346791 15832573 ~ 15836231 (-)
G34633 NA other downstream 395125 15787386 ~ 15787897 (-)
G34718 NA other downstream 901373 15281016 ~ 15281649 (-)
CI01000004_15086759_15087492 NA other downstream 1092664 15086671 ~ 15087575 (-)
G34934 NA other upstream 206868 16401745 ~ 16421506 (-)
G34982 NA other upstream 307848 16502725 ~ 16515974 (-)
G34995 NA other upstream 334565 16529442 ~ 16533008 (-)
G34999 NA other upstream 342318 16537195 ~ 16541278 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location