CI01000004_16160899_16178772 (AP1G2)


Basic Information

Item Value
gene id CI01000004_16160899_16178772
gene name AP1G2
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 16160357 ~ 16179144 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_16160899_16178772.mRNA
AGATGCAGTGTACCACAAAGCAAGCTATGTTTACATCTCCTGCAAACGATGAGAGCGACGCGCAGCACTAATTGATCGCCGTTTTCAAGCCTTTCCTGTCGTTATCTCTTAAATGTTTACGTTTTATTAGCATTTTATTGCATCTGATTGTAATGCACACACAGGGTTTGTCTTTTGAAGATAAACTGAGAAACCGAGAAAACTGACTAGATATGAACACATTGACTGCGCTGTAAATAATACACGAAAATGTCTCTGTTAGATGTCAAAAGGATAATGAGATGTGGAATGTGTTTAGATATGAAGGAACGTCAAAGCGTCTGAAGGCCGCGGAGCGCGCGCGGTGCGCATGCGGGACTGAATGTAGTCACCATGGGAAGATCTGAAACGAAAGCAGATACAGTCATGACTCCATCAGTGCGTTTACAGGAAATGATTCGGGTCATCCGAAGTGCCCGGACACAAGGTGAGGAGAGGGGCATCATCCAAAGAGAGTGTGCGGACATCCGGGCACAGTTTCGTCAGGGTGACAATGGGGAACGTTCGCACAGCCTTGCAAAACTACTCTACGTGCACATGCTGGGCTACCCTGCACACTTTGGACAGATGGAGTGTGTACGTCTGATTGCCAGCCCCAGGTACAACGAGAAGCGGATGGGTTACCTGGGAGCCATGATGCTCCTGGATGAGAAGCAGGATGCTAGCTTACTGATTACCAACTCAATCAAGAATGACCTTTCTCACAGCAGTCAGTATGTTCAGTCTCTGGCTCTATGCACTCTGGCCTGCATGGGTTCAGCTGAAATGTGTCGAGACCTGGCACCAGAGATCGAACGGCTCCTCAGGGCCTCTAATTCTTATATCAAGAAAAAGGCCACGCTGTGTGCCGTCCACATAATAAGAAAGGTCCCAGAGCTTGCAGAGCTGTTTATTCCTTCAGCAAGGTCTCTTCTGTCTGAGAAGAACCATGGGGTTTTGCATGGGGCTGTAGTTCTCATCACTGAATTGTGTGAGCGAAATCCTGACACTCTCGATCAGTTCCGCAAGGCTGTTCCTGAACTGGTTCAGATCATGAAAGGTCTTGTGACATCCAGCTATTCTCCAGAGCACAATGTAGCTGGTATCAGCGACCCCTTTCTGCAGGTGCGCATTCTTAGATTGCTAAGGATTCTGGGTCACAATAATGACACCGCTAGTGATGCCATGAATGACTTGTTGGCACAGGTGGCTACAAATACAGACAGCAGTAAGACTGCAGGCAGTGCTGTGCTGTATGAAACGGTCCTGACTATCATGGACATCAACTCAGAGAGTGGACTTAGGGTGCTAGCTGTAAATATTCTGGGGAGGTTTCTACTTAATAACGACAGGAATATTCGCTACATATCAATGACATCACTCCAGAAGATAGTGCAGACGGACCACAATGCAGTGCAGCGGCACAGAGGCACCATTGTGGACTGCCTGAAAGATCAAGACACCTCGGTGAAACGTCGCGCACTGGAACTGTCACTCGCCCTTGTGTCGGCTGTGAACATTCGCTCAATGATGAAGGAGCTTCTCATTTTTCTTTCAACCTGTCCCCCAGAGCTTCGATCTCAAACCGCTTCTGGCATCTTCAACGCTGCTGAAAGGTATTCCCCTTCTAAGCGCTGGCACATTGATACCATCCTGCATGTGCTCACTACGGCAGGGGGCGATGTAAGAGATGAGACTGTGCCCAACCTAATCCAACTCATCTCTACTGCGTCTGAGCTCCACTGTTACACTGTTCACAAGCTCTATAGAGCGCTTGTAAAAGATATTTCACAGCAATCCTTGGTCCAAGTTGCGTGCTGGTGTATAGGGGAGTATGGAGACCTGCTGATGAAGGGCGAGTGTGAGGAGATTGAGCCTGTGCAGGTTTCAGAAGATGACGCCCTGGAGGCCTTGGAAACGGTTCTACAGTCTCACATGTCATCGCCGGCAACCAGAGGCTTCGCACTCACTGCTACCATGAAGCTGAGCACTCGTATCACTGACAACGTCGATCGAATCAGAAGTATTGTCAGTATTTACGGCAGCTGCATTGACCTGGAACTTCAGCAGAGAGCGGTCGAATATAACGCGCTCTTCAAGAAATATGACCACATGAGAGCTGCAGTGTTGGAAAGAATGCCTGTGATTGATAAGAACTCACCTGGACACACTAATGGAGACACATCAGGAGAGATTAAGGAGCCGGACACATCCAAACCCAAACCAGTGTGTGACCTTCTGGATCTCTTGGGTGGGACCGACACACCTCTTCAGCCCAACCCCGCCCCAACCAGCACTTCAACAACTACCTCTAGTGCCGATCTTCTTGACCTGCTGGGAGGACTGGAGCCGACACCAGTTCCCTCTGTGACGGTGTATGAGAAGAATGGATTGAGTCTGAAGATGCAGTGTGACAAACAGACAGAAACTGACATCACGGTCACCCTTATTGCCTCTAACTCCACTCAGAGTGACGTCACCAACTTCACTCTTCAAGCAGCAGTACCTAAGGTCAGCCTTAAGATGCGGGTTCGAGTGTCTTACTCAAATCAGGGTGCAGTGCATCAGGACACAGTACAGATTGACTCCTTTCCTAGTCCGGCCTGGAACGGTCAGCCATCAATCAACCCCTTGTGACCGACCTACACAAGTCCTGAATCTCCATGACTGTCTTTCCCATTGAGATGGAAATCTACGGAAATAGGCAGCTCTCTGTAAACCTCTCTAATATGGACTGAACGCTCTCCCAGCACAGATATTATACAGCAGGTTTCTATGAAGTGTTACCTTGGTTTGAATTGTCTAGAACAAAGTGTGGTTTGATGTGCTGTCATTACTGCACAAGAGTGAACAGTCAAACTATTGTACAATAAGCTCCTTTATGCACCGTCACTGAACAACCCTGTCAACAAGTTGAAGAACTTGAATTACAGATATCCTTCATATGCCCTAATTACTCATACTTTCTGGGAATTAACATCAGAAGTGAAGGTCAGTTGAGCTCCAATTGCCTTACTGTTCTCATCATTATATTTTTGCTGAAATTGTGAATTTGAACTTTCCATCTCACATATGTCTTAATCATATTTCTCAAACAGCCTCATTGTTGTGTGTGAAACCACAAATATCCATTTTTCCGATATGTTTATTCCTCTTTTATCCGAACACAATACAATAAA

Function

symbol description
ap1g2 Predicted to enable clathrin adaptor activity. Acts upstream of or within axis elongation; central nervous system development; and vasculature development. Predicted to be located in Golgi apparatus; cytoplasmic vesicle; and membrane. Predicted to be part of AP-1 adaptor complex. Is expressed in central nervous system and head. Orthologous to human AP1G2 (adaptor related protein complex 1 subunit gamma 2).

GO:

id name namespace
GO:0008565 obsolete protein transporter activity molecular_function

KEGG:

id description
K12391 AP1G1; AP-1 complex subunit gamma-1

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_16160899_16178772.mRNA True 3197 mRNA 0.47 21 16160357 16179144

Neighbor

gene id symbol gene type direction distance location
CI01000004_16155534_16158067 NA coding downstream 2290 16155372 ~ 16158067 (-)
CI01000004_16152238_16154327 NA coding downstream 6030 16151733 ~ 16154327 (-)
CI01000004_16146406_16149756 NA coding downstream 10601 16146076 ~ 16149756 (-)
CI01000004_16092821_16115520 NA coding downstream 44827 16092706 ~ 16115530 (-)
CI01000004_16079875_16086958 ACIN1, ACIN1A coding downstream 73146 16079875 ~ 16087211 (-)
CI01000004_16183581_16194877 SLC7A8A, SLC7A8B, SLC7A8 coding upstream 3878 16183022 ~ 16194877 (-)
CI01000004_16202928_16216455 PRMT5 coding upstream 23706 16202850 ~ 16216760 (-)
CI01000004_16449696_16450112 NA coding upstream 269272 16448416 ~ 16450248 (-)
CI01000004_16455194_16455607 NA coding upstream 275953 16455097 ~ 16455970 (-)
CI01000004_16459173_16459658 NA coding upstream 279826 16458970 ~ 16461331 (-)
G34639 NA non-coding downstream 23661 16123560 ~ 16136696 (-)
G34837 NA non-coding downstream 135576 16023244 ~ 16024781 (-)
G34836 NA non-coding downstream 137234 16019558 ~ 16023123 (-)
G34830 NA non-coding downstream 161210 15998819 ~ 15999147 (-)
G34866 NA non-coding upstream 54167 16233311 ~ 16233711 (-)
G34867 NA non-coding upstream 54688 16233832 ~ 16234289 (-)
G34868 NA non-coding upstream 57213 16236357 ~ 16236643 (-)
G34869 NA non-coding upstream 57746 16236890 ~ 16302100 (-)
G34950 NA non-coding upstream 255831 16434975 ~ 16442439 (-)
G34796 NA other downstream 296609 15860613 ~ 15863748 (-)
CI01000004_15832789_15836192 NA other downstream 324126 15832573 ~ 15836231 (-)
G34633 NA other downstream 372460 15787386 ~ 15787897 (-)
G34718 NA other downstream 878708 15281016 ~ 15281649 (-)
CI01000004_15086759_15087492 NA other downstream 1069999 15086671 ~ 15087575 (-)
G34934 NA other upstream 222601 16401745 ~ 16421506 (-)
G34982 NA other upstream 323581 16502725 ~ 16515974 (-)
G34995 NA other upstream 350298 16529442 ~ 16533008 (-)
G34999 NA other upstream 358051 16537195 ~ 16541278 (-)
CI01000004_16596848_16599652 NA other upstream 399523 16596476 ~ 16601205 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_016686 zp3f.2 coding NC_007113.7 CM002886.2 38285414 ~ 38312757 (-)