CI01000004_16152238_16154327


Basic Information

Item Value
gene id CI01000004_16152238_16154327
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 16151733 ~ 16154327 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_16152238_16154327.mRNA
AGCAATTACTGTGGACTGTGGCAAAAACTCTGTGTCTGTGCGATGGGCCGAAGCAAACTCTCAAGTGGATCCGTCCCTTCTCCGCCTGGGTGGCTGTCCTCCAACCCAGGTTTCTGTAAAACCTCAAGGGTCCGAGGCCGTCTTCTATGCTGAGTTTGGGGCCTGTGATATTCGGAGGCTGGTGACAATCGATGAGCTTGTATATGAGACTGAGATCACTTCTACAACGTTGTCAAAAGCAAAACCGATTTATTACCCTGTGGCCTGTAAATATGAAAGGCCAGAAGACTGGGCGCCGCCTCTGTATGATCCACTGCTGTTTCATATACATGGTCAGGGAGATCTGACCTTTCGTATGGCTCTCATGAAGGATGACTTCAGTGGTGTGGCCACTACCACAACATTCTCACTAGGCACAACAATCCCAATTGCTGCTTCAGTTGACCAGAAGACCCATCAGCCATTAATACTGCTCCTAGATGAATGTGTGGCCTCCACAACACCAGAATTGGGTCTAGATTCTCATATTTACCCACTCATTACCAATAAGGGGTCTACCTCCATTGCACGCTTGTGGCATGGGACCCAAGAGGCCTGGACGGTAGCAAAAAGGCTTGTCAATATGACAGGAACAGCTCACGTTGCTGTGACACTAGCTGTCAAGGAAGAAAGAAAAGAGAAATAACAGCAGGTGAATGTTCCCCATTTTTGCTTAAAATACAAACCATGATTGAATGATGCTTCCATAAGGCGCAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAATGTAGGCCCCATTTCAGGAGTTCATGTGAAGAATCATTTTGAGTATTTGAGTTTTACTGGATATAAACTGACTGCATGATCTACAGATTCCTTTACTTCAACTTCTGTGCTTGGGCCTCTTGTTATTATTGAAAACTAAGGACTGCTGGATCATGCCTTATGGATTTGACAAGGTTTGCTATCTTTGTTGGTTGTTATTATTATTGTTATTATTATTTATTATTATTATTATTATTATTATTATTATTCATTTTCCATTATGTGACTTCTATTTCATGTTTAATTGTTTCCAAAGATGGGTGCCTCCAAACCACTGGAGTTGTTTTTGGACGTCCTAACGGTGGAGCTCTCTACCTGTGCCTGTTCAACTTGTTTCTTGAGAGAAATAAA

Function

NR:

description
ZPC domain containing protein 2, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_16152238_16154327.mRNA True 1190 mRNA 0.41 6 16151733 16154327

Neighbor

gene id symbol gene type direction distance location
CI01000004_16146406_16149756 NA coding downstream 1977 16146076 ~ 16149756 (-)
CI01000004_16092821_16115520 NA coding downstream 36203 16092706 ~ 16115530 (-)
CI01000004_16079875_16086958 ACIN1, ACIN1A coding downstream 64522 16079875 ~ 16087211 (-)
CI01000004_15999644_16005705 NA coding downstream 145308 15999495 ~ 16006425 (-)
CI01000004_15991836_15995032 CBLN12, CBLN3, CBLN1 coding downstream 156549 15991640 ~ 15995184 (-)
CI01000004_16155534_16158067 NA coding upstream 1045 16155372 ~ 16158067 (-)
CI01000004_16160899_16178772 AP1G2 coding upstream 6030 16160357 ~ 16179144 (-)
CI01000004_16183581_16194877 SLC7A8A, SLC7A8B, SLC7A8 coding upstream 28695 16183022 ~ 16194877 (-)
CI01000004_16202928_16216455 PRMT5 coding upstream 48523 16202850 ~ 16216760 (-)
CI01000004_16449696_16450112 NA coding upstream 294089 16448416 ~ 16450248 (-)
G34639 NA non-coding downstream 15037 16123560 ~ 16136696 (-)
G34837 NA non-coding downstream 126952 16023244 ~ 16024781 (-)
G34836 NA non-coding downstream 128610 16019558 ~ 16023123 (-)
G34830 NA non-coding downstream 152586 15998819 ~ 15999147 (-)
G34866 NA non-coding upstream 78984 16233311 ~ 16233711 (-)
G34867 NA non-coding upstream 79505 16233832 ~ 16234289 (-)
G34868 NA non-coding upstream 82030 16236357 ~ 16236643 (-)
G34869 NA non-coding upstream 82563 16236890 ~ 16302100 (-)
G34950 NA non-coding upstream 280648 16434975 ~ 16442439 (-)
G34796 NA other downstream 287985 15860613 ~ 15863748 (-)
CI01000004_15832789_15836192 NA other downstream 315502 15832573 ~ 15836231 (-)
G34633 NA other downstream 363836 15787386 ~ 15787897 (-)
G34718 NA other downstream 870084 15281016 ~ 15281649 (-)
CI01000004_15086759_15087492 NA other downstream 1061375 15086671 ~ 15087575 (-)
G34934 NA other upstream 247418 16401745 ~ 16421506 (-)
G34982 NA other upstream 348398 16502725 ~ 16515974 (-)
G34995 NA other upstream 375115 16529442 ~ 16533008 (-)
G34999 NA other upstream 382868 16537195 ~ 16541278 (-)
CI01000004_16596848_16599652 NA other upstream 424340 16596476 ~ 16601205 (-)

Expression


Co-expression Network