CI01000004_16455194_16455607


Basic Information

Item Value
gene id CI01000004_16455194_16455607
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 16455097 ~ 16455970 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_16455194_16455607.mRNA
ACATCCTTAACCACTACCCGTTTCCCTTTTGGCTCCACCCAATTTACGTATTAAAAGTGAAAGAGTTATTCATTTCTAAAGGTTGTTTGGCAGCAAAACACATGTAAGTAAAATTTTTAATTAAACAAACTTTATTCAGCTAAATTAAGCGAAGCTCTTTAAGCTTTTAAATGATGCAGAGAACTAACTTTGATTTAGAAAGAAAGTTTCACAGCATAATTTGTGTAGTGTTCCCAAGTTCCCTTTATAACTTTCACACTGCAAACTGCAGATTTTTGTTATTATACAAATATTGTCTTTGGCTGTTCACTAATTATGAAATATATGAAAACATTTCAAAGTGCTTTGGTTACTGTGAATGCCATGGGGGACAACGATTATGACACTGGAATACAGAGGTATCCTGGACGGAGAACATACATCATGTACCACGGCACTACGATGGTAAACGCACAAAAGATCCAACGTGAAGGATTCAGACCCTCTTCTGATGGGATGCTCGGGCCAGGAGTCTATGTGAGCCGGAGTAAAGAGAAAGCTTCTCGTTACCCTATAAATGCTGGAGGACAACAGCTGGCCATTCTTAAACTAAGTGTTCGAGTGGGAAAAGTGAAGAAGATCAATTGTCAGGGTCATCCTTTACAGAAAACCTGGAATCAACATGGTTATGACACTGCGTGGGTCCCTGCGAACTGTGGAATGGTTCTCAGTGGATTAGAAGAGGACTGTATTTATGATCCAAGCCGGATCAAGGTTCTAGAGATTCTTCCAAACTAGAAACTAAAACTAAAAATGTTTGAAGTAAAAAAAAAACTAGGTTATTTGAACTGTAAAAACCTTGTTTAAATGAATACATGAATTAATCAATAATAAA

Function

NR:

description
interferon-inducible protein Gig2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_16455194_16455607.mRNA True 874 mRNA 0.37 1 16455097 16455970

Neighbor

gene id symbol gene type direction distance location
CI01000004_16449696_16450112 NA coding downstream 4849 16448416 ~ 16450248 (-)
CI01000004_16202928_16216455 PRMT5 coding downstream 238337 16202850 ~ 16216760 (-)
CI01000004_16183581_16194877 SLC7A8A, SLC7A8B, SLC7A8 coding downstream 260220 16183022 ~ 16194877 (-)
CI01000004_16160899_16178772 AP1G2 coding downstream 275953 16160357 ~ 16179144 (-)
CI01000004_16155534_16158067 NA coding downstream 297030 16155372 ~ 16158067 (-)
CI01000004_16459173_16459658 NA coding upstream 3000 16458970 ~ 16461331 (-)
CI01000004_16596848_16599652 NA coding upstream 140506 16596476 ~ 16601205 (-)
CI01000004_16626200_16639382 COPB2 coding upstream 169966 16625936 ~ 16639382 (-)
CI01000004_16641559_16646208 RBP2B coding upstream 185432 16641402 ~ 16646239 (-)
CI01000004_16654485_16672242 RBP1 coding upstream 198478 16654448 ~ 16672310 (-)
G34952 NA non-coding downstream 10567 16444293 ~ 16444530 (-)
G34950 NA non-coding downstream 12658 16434975 ~ 16442439 (-)
G34869 NA non-coding downstream 152997 16236890 ~ 16302100 (-)
G34868 NA non-coding downstream 218454 16236357 ~ 16236643 (-)
G34867 NA non-coding downstream 220808 16233832 ~ 16234289 (-)
G34963 NA non-coding upstream 17091 16473061 ~ 16473289 (-)
G34995 NA non-coding upstream 73787 16529442 ~ 16533008 (-)
G35007 NA non-coding upstream 104578 16560548 ~ 16560776 (-)
G34915 NA non-coding upstream 108520 16564490 ~ 16576188 (-)
G34934 NA other downstream 33591 16401745 ~ 16421506 (-)
G34796 NA other downstream 591349 15860613 ~ 15863748 (-)
CI01000004_15832789_15836192 NA other downstream 618866 15832573 ~ 15836231 (-)
G34633 NA other downstream 667200 15787386 ~ 15787897 (-)
G34718 NA other downstream 1173448 15281016 ~ 15281649 (-)
G34982 NA other upstream 46755 16502725 ~ 16515974 (-)
G34999 NA other upstream 81225 16537195 ~ 16541278 (-)
G35053 NA other upstream 239801 16695771 ~ 16895093 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
tiger barb (Puntius tetrazona) G13380 NA non-coding NC_056700.1 CM032069.1 18061570 ~ 18065663 (+)