CI01000004_15827737_15828938


Basic Information

Item Value
gene id CI01000004_15827737_15828938
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 15827668 ~ 15828960 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_15827737_15828938.mRNA
ATTATTAGTTACCGGCAGCACAATGTGGATTCTTATATCAGTTTTAATGCTCAATGTGTGGGCTATACCAGCAGATGATGAACTTTCACCAAACATAAACATCCTTGAAGAACTGGGGAAGATGGAAGCAAGGATGAAATCTATGGAGAAGGAAACGGAGCTACTAAGAACAAAGAACGAAGAACAAGCAAAAGAACTGAAGATTTTGTATGATACAACAAAGATCCAAATGGATGAACTAATAAAGCAGAATCAAGCTCCTAAAGTGGCTTTCTCAGCCTCTCTGTTGACCTCTTTTGGACCACAAAGCGTTGGACCATTTCCTGATGGTTTACACACCCTGATTTACAAACACGTCTTCCTCAACACTGGAGACGCCTATGATGCAGAAACAGGAATCTTCACAGCACCTGTGAAGGGAGTGTATGTATTCAGGGTTTTCTCAAAGGCCTTCGGAAATCCACAGAAAGCCGTTACCGCAGGCCTGTTTAAAAATGACCAGCATATCATGTCTACACATGGACACCAACAAAGTGGTTTTATCAGTTCTTCAAATGGAGTCTCTCTGCTGCTAGAAAAAGGGGATAAAATAAAAGTAAATCTCTATCCTGGCCAGTGGATTTTTGACAATGGAGAACACCATCACAGCACATTCAGTGGACATCTGCTTTTCACCATGTGATTTTGCAGACAGTTTATTCACCCAAAAAAGCTTTTCATCCATAAACGATGTACACTCCTTGAAAATAAA

Function

NR:

description
Si:rp71-1g18.7 protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_15827737_15828938.mRNA True 751 mRNA 0.40 4 15827668 15828960

Neighbor

gene id symbol gene type direction distance location
CI01000004_15760841_15761919 HBL4 coding downstream 65681 15760790 ~ 15761987 (-)
CI01000004_15751774_15753519 NA coding downstream 72271 15751733 ~ 15755397 (-)
CI01000004_15726420_15733105 NA coding downstream 94563 15726052 ~ 15733105 (-)
CI01000004_15702447_15708692 METTL17 coding downstream 118976 15702371 ~ 15708692 (-)
CI01000004_15653837_15673610 NFATC4 coding downstream 154058 15653725 ~ 15673610 (-)
CI01000004_15832789_15836192 NA coding upstream 3624 15832573 ~ 15836231 (-)
CI01000004_15836936_15841048 NA coding upstream 7502 15836462 ~ 15841829 (-)
CI01000004_15881212_15881809 NA coding upstream 51903 15880140 ~ 15883692 (-)
CI01000004_15911104_15915972 NA coding upstream 81976 15910936 ~ 15916019 (-)
CI01000004_15922924_15923872 NA coding upstream 93766 15922726 ~ 15923872 (-)
G34787 NA non-coding downstream 2567 15824811 ~ 15825101 (-)
G34786 NA non-coding downstream 4583 15822702 ~ 15823085 (-)
G34783 NA non-coding downstream 7710 15819749 ~ 15819958 (-)
G34785 NA non-coding downstream 10296 15816835 ~ 15817372 (-)
G34784 NA non-coding downstream 13761 15813029 ~ 15813907 (-)
G34790 NA non-coding upstream 13341 15842301 ~ 15842864 (-)
G34792 NA non-coding upstream 18007 15846967 ~ 15847928 (-)
G34793 NA non-coding upstream 20623 15849583 ~ 15849826 (-)
G34794 NA non-coding upstream 22304 15851264 ~ 15851868 (-)
G34633 NA other downstream 39771 15787386 ~ 15787897 (-)
G34718 NA other downstream 546019 15281016 ~ 15281649 (-)
CI01000004_15086759_15087492 NA other downstream 737310 15086671 ~ 15087575 (-)
G34668 NA other downstream 774893 15051176 ~ 15052775 (-)
G34632 NA other downstream 802447 15011361 ~ 15025221 (-)
G34796 NA other upstream 31653 15860613 ~ 15863748 (-)
G34934 NA other upstream 572785 16401745 ~ 16421506 (-)
G34982 NA other upstream 673765 16502725 ~ 16515974 (-)
G34995 NA other upstream 700482 16529442 ~ 16533008 (-)

Expression


Co-expression Network