G27183


Basic Information

Item Value
gene id G27183
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 4659347 ~ 4661137 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU30682
AGCCAAGAGTTCCTCTACAGCAGCAGAGTAGAGCCACTCCTTTTCTGTTCTCTTGGTATAGCCAGGAACTTCCTCATTCTTCTTGTTGAACTTGAGATTAAGGCCCACATTGACTTTCTGCTCTCCATGAGGACTTTTTTTTGGATCCTCTTCCAATGAAGATGCTACCGGAGAACCTTGAGACGAGGTAGCTGGTGATACCAAGGCGAGAGGCGAGCACGTACCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU30682 True 226 lncRNA 0.48 2 4659347 4661137

Neighbor

gene id symbol gene type direction distance location
CI01000004_04535801_04536013 NA coding upstream 122838 4535258 ~ 4536509 (+)
CI01000004_04498877_04532504 CLCN2, CLCN2A coding upstream 126261 4498877 ~ 4533086 (+)
CI01000004_04414110_04428551 CC2D1B coding upstream 230796 4414110 ~ 4428551 (+)
CI01000004_04412723_04413196 NA coding upstream 246151 4411601 ~ 4413196 (+)
CI01000004_04400735_04404462 ELOVL1A coding upstream 254561 4400422 ~ 4404786 (+)
CI01000004_04690908_04706755 ATP1B3A coding downstream 29771 4690908 ~ 4706900 (+)
CI01000004_04754556_04784656 ATR coding downstream 93419 4754556 ~ 4784757 (+)
CI01000004_04786239_04788953 NA coding downstream 125102 4786239 ~ 4788961 (+)
CI01000004_04798717_04889650 ARHGEF4 coding downstream 137580 4798717 ~ 4889650 (+)
CI01000004_04924543_04956339 VAV3B coding downstream 263371 4924508 ~ 4956435 (+)
G27147 NA non-coding upstream 2014 4461118 ~ 4657333 (+)
G27176 NA non-coding upstream 70021 4585555 ~ 4589326 (+)
G27149 NA non-coding upstream 85185 4562157 ~ 4574162 (+)
G27159 NA non-coding upstream 222845 4436181 ~ 4436502 (+)
G27166 NA non-coding upstream 248042 4410444 ~ 4411305 (+)
G27265 NA non-coding downstream 25571 4686708 ~ 4686922 (+)
G27271 NA non-coding downstream 33836 4694973 ~ 4695917 (+)
G27278 NA non-coding downstream 62283 4723420 ~ 4723630 (+)
G27305 NA non-coding downstream 94593 4755730 ~ 4756227 (+)
G27295 NA non-coding downstream 234415 4895552 ~ 4900837 (+)
CI01000004_03550525_03552621 PTGER4C other upstream 1106901 3550329 ~ 3553423 (+)
G26245 NA other upstream 1136954 3509017 ~ 3522393 (+)
CI01000004_02745885_02768971 NA other upstream 1900409 2745885 ~ 2769135 (+)
G25992 NA other upstream 1922579 2736536 ~ 2736768 (+)
G25882 NA other upstream 2086298 2548075 ~ 2573049 (+)
G27805 NA other downstream 711688 5372825 ~ 5373803 (+)
G28165 NA other downstream 1071452 5732589 ~ 5733001 (+)
G28302 NA other downstream 1808891 6470028 ~ 6502087 (+)
CI01000004_06571261_06572539 SEP15 other downstream 1910083 6570771 ~ 6572667 (+)
CI01000004_07654234_07655677 MRPL34 other downstream 2993635 7654234 ~ 7656383 (+)

Expression


Co-expression Network