CI01000004_04535801_04536013


Basic Information

Item Value
gene id CI01000004_04535801_04536013
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 4535258 ~ 4536509 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_04535801_04536013.mRNA
GTATAAATACCATTGCAGGGAGTTTGTAGTCACTGTGCAGATCTCATCCAGTAATGTTCAAATTTGAATCATCAAAGTATTAAAATGTAATTCATTACAATGATGGATATTCTGTGTACCTGCATATCTGAATTGTTTTACATATATGTGAAGCTTTTAACATGATTTTGAGCTGTCGACTGTGCAATATTAGAATTAATGCTTGCCGAATAGGGTTATTTTACTAAACACTGGCTCTGTTTCTACAGTGCATATTATTTTGAAACTGTTTGCAATAATGCACATCATGAATAGGACATGTACTGAAACAAACTTTTAATGCCTTTAAATTTCGCTTTCACAACCTGCAAAGTGTTTACTGGACCTCAGCGGTGGAGTTTTCACTAGTTTCAACCTGAGAATGGTGTTTTAATGTTCTGTTTGCATCAAAACTGTCTGAACGACGCTATGCAGTATGGTCAAGAACAGCACAACTACCCCAGACGCAGAGCCAAATGGAGAATGAGTTTTTTTTTTTTTTTTTTTTTCTTGTGCACTGCAGAAATGGGAGGCTACGGGTTTGATTTAAACGGATCAAGGCGAGTGGACCAAAACCATAACCATGACTTCCTGACACAGCCTTTTCTCATTCTCTCAGAAACGCCTGCTACGGGCAGAGCAGGATGTTTCATCGCCATTTATCCGGCTGCACTAATCAGCTGTTTTATTAACGTTTGTTATAAAACCGAATCCTGGTGTGGAACAGGAATAACTTAAGCTAATAATGATCTTTAGATATGTTGTGTCACGTTTTGTCTCTGTTAGCCGCTTGTGCAGTTTAAGTCAAGCCCACAATGTGTAAAGTGTCTGCTAATATGCCGCACATTCAGTGTAGAGTTAAGCAATAAGTCTGCGCCCATATCCGTAAATGGTTTTTATAAATCATTTGCTTGTACAGAATACAGGGTAAAGCGGTATGTATATGAACTCTATTCACATACCCTGTACATATAGAGATAAGCATACTGAATCAGCGGTTACCATTATTTTTCAGAAAACATGAAATTGTTTTGTACATCAGTAAATATTAAATTTCAACTTTAAAGCTTTGTTTTATGCAACTCATTTGTGTGGGAAATACTGTGTTGTAAAGTTGGAATATGCTGGAATTCTGCAATATGTAATGATTCAGCAGTGAAACGTATGAATATACACATAACTTTAATGCAATCATAATTCTCACATTTGACCTCAGACATTTTCTGTACAAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_04535801_04536013.mRNA True 1252 mRNA 0.36 1 4535258 4536509

Neighbor

gene id symbol gene type direction distance location
CI01000004_04498877_04532504 CLCN2, CLCN2A coding upstream 2172 4498877 ~ 4533086 (+)
CI01000004_04414110_04428551 CC2D1B coding upstream 106707 4414110 ~ 4428551 (+)
CI01000004_04412723_04413196 NA coding upstream 122062 4411601 ~ 4413196 (+)
CI01000004_04400735_04404462 ELOVL1A coding upstream 130472 4400422 ~ 4404786 (+)
CI01000004_04315741_04317415 GLULB, GLULA, GLNA, GS02, GLUL, GS01, GS04 coding upstream 217642 4314776 ~ 4317616 (+)
CI01000004_04690908_04706755 ATP1B3A coding downstream 154399 4690908 ~ 4706900 (+)
CI01000004_04754556_04784656 ATR coding downstream 218047 4754556 ~ 4784757 (+)
CI01000004_04786239_04788953 NA coding downstream 249730 4786239 ~ 4788961 (+)
CI01000004_04798717_04889650 ARHGEF4 coding downstream 262208 4798717 ~ 4889650 (+)
CI01000004_04924543_04956339 VAV3B coding downstream 387999 4924508 ~ 4956435 (+)
G27159 NA non-coding upstream 98756 4436181 ~ 4436502 (+)
G27166 NA non-coding upstream 123953 4410444 ~ 4411305 (+)
G27146 NA non-coding upstream 179714 4355317 ~ 4355544 (+)
G27138 NA non-coding upstream 199928 4335045 ~ 4335330 (+)
G27133 NA non-coding upstream 213890 4321159 ~ 4321368 (+)
G27149 NA non-coding downstream 25648 4562157 ~ 4574162 (+)
G27176 NA non-coding downstream 49046 4585555 ~ 4589326 (+)
G27254 NA non-coding downstream 113897 4650406 ~ 4676215 (+)
G27183 NA non-coding downstream 122838 4659347 ~ 4661137 (+)
G27265 NA non-coding downstream 150199 4686708 ~ 4686922 (+)
CI01000004_03550525_03552621 PTGER4C other upstream 982812 3550329 ~ 3553423 (+)
G26245 NA other upstream 1012865 3509017 ~ 3522393 (+)
CI01000004_02745885_02768971 NA other upstream 1776320 2745885 ~ 2769135 (+)
G25992 NA other upstream 1798490 2736536 ~ 2736768 (+)
G25882 NA other upstream 1962209 2548075 ~ 2573049 (+)
G27805 NA other downstream 836316 5372825 ~ 5373803 (+)
G28165 NA other downstream 1196080 5732589 ~ 5733001 (+)
G28302 NA other downstream 1933519 6470028 ~ 6502087 (+)
CI01000004_06571261_06572539 SEP15 other downstream 2034711 6570771 ~ 6572667 (+)
CI01000004_07654234_07655677 MRPL34 other downstream 3118263 7654234 ~ 7656383 (+)

Expression


Co-expression Network