G27146


Basic Information

Item Value
gene id G27146
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 4355317 ~ 4355544 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU30628
CTTGGATGAAATGGGGGAGAGTAAATTATCAGGAAATTTTTATTTGAAAGTGAACTAATCCTTTAAAGGTGCAGTAAGTGATTTCTGAGAAACACTGTTGTAAATGGATCGGACCGAGCACCAAAACACACTTGTAGCCAATCAGCAGTAAGGGGTGTATACACTCATGATGGGGGAGGTGCCTGTGTTGCATAGCGTGTTTGTGATTTTGGGGGCGGGGCTATCAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU30628 True 228 lncRNA 0.42 1 4355317 4355544

Neighbor

gene id symbol gene type direction distance location
CI01000004_04315741_04317415 GLULB, GLULA, GLNA, GS02, GLUL, GS01, GS04 coding upstream 37701 4314776 ~ 4317616 (+)
CI01000004_04231304_04239652 NA coding upstream 115194 4231211 ~ 4240123 (+)
CI01000004_04172679_04173047 PBX1 coding upstream 180965 4171654 ~ 4174352 (+)
CI01000004_04123289_04123846 NA coding upstream 231354 4122624 ~ 4123963 (+)
CI01000004_04048829_04053849 NA coding upstream 300747 4045928 ~ 4054570 (+)
CI01000004_04400735_04404462 ELOVL1A coding downstream 44878 4400422 ~ 4404786 (+)
CI01000004_04412723_04413196 NA coding downstream 56057 4411601 ~ 4413196 (+)
CI01000004_04414110_04428551 CC2D1B coding downstream 58566 4414110 ~ 4428551 (+)
CI01000004_04498877_04532504 CLCN2, CLCN2A coding downstream 143333 4498877 ~ 4533086 (+)
CI01000004_04535801_04536013 NA coding downstream 179714 4535258 ~ 4536509 (+)
G27138 NA non-coding upstream 19987 4335045 ~ 4335330 (+)
G27133 NA non-coding upstream 33949 4321159 ~ 4321368 (+)
G27044 NA non-coding upstream 187068 4168046 ~ 4168249 (+)
G27027 NA non-coding upstream 256599 4098327 ~ 4098718 (+)
G27025 NA non-coding upstream 273002 4080971 ~ 4082315 (+)
G27166 NA non-coding downstream 54900 4410444 ~ 4411305 (+)
G27159 NA non-coding downstream 80637 4436181 ~ 4436502 (+)
G27147 NA non-coding downstream 105574 4461118 ~ 4657333 (+)
G27149 NA non-coding downstream 206613 4562157 ~ 4574162 (+)
G27176 NA non-coding downstream 230011 4585555 ~ 4589326 (+)
CI01000004_03550525_03552621 PTGER4C other upstream 802871 3550329 ~ 3553423 (+)
G26245 NA other upstream 832924 3509017 ~ 3522393 (+)
CI01000004_02745885_02768971 NA other upstream 1596379 2745885 ~ 2769135 (+)
G25992 NA other upstream 1618549 2736536 ~ 2736768 (+)
G25882 NA other upstream 1782268 2548075 ~ 2573049 (+)
G27805 NA other downstream 1017281 5372825 ~ 5373803 (+)
G28165 NA other downstream 1377045 5732589 ~ 5733001 (+)
G28302 NA other downstream 2114484 6470028 ~ 6502087 (+)
CI01000004_06571261_06572539 SEP15 other downstream 2215676 6570771 ~ 6572667 (+)
CI01000004_07654234_07655677 MRPL34 other downstream 3299228 7654234 ~ 7656383 (+)

Expression


Co-expression Network