G27044


Basic Information

Item Value
gene id G27044
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 4168046 ~ 4168249 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU30523
AGAACAAACCTCTTGCGGAAGCTCAAACATGCTGCGTACACAAGAATGAACCTCATTGGTTCTTGCATGGCAAGCAAACATGCTTGAGCTTCCGTTTACCACAACTGATGTGTGAGTTGATGAATGTTTCTATGTGAATAAAAGCCTAAATTCAATCTGTTCACCATAAAGCGATCGTGTCTCTTCAGAAAATTTGGACTAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU30523 True 204 lncRNA 0.40 1 4168046 4168249

Neighbor

gene id symbol gene type direction distance location
CI01000004_04123289_04123846 NA coding upstream 44083 4122624 ~ 4123963 (+)
CI01000004_04048829_04053849 NA coding upstream 113476 4045928 ~ 4054570 (+)
CI01000004_03934726_03935639 NA coding upstream 232176 3933685 ~ 3935870 (+)
CI01000004_03878083_03909016 NA coding upstream 258737 3878019 ~ 3909309 (+)
CI01000004_03814120_03839793 NA coding upstream 328239 3814051 ~ 3839807 (+)
CI01000004_04172679_04173047 PBX1 coding downstream 3405 4171654 ~ 4174352 (+)
CI01000004_04231304_04239652 NA coding downstream 62962 4231211 ~ 4240123 (+)
CI01000004_04315741_04317415 GLULB, GLULA, GLNA, GS02, GLUL, GS01, GS04 coding downstream 146527 4314776 ~ 4317616 (+)
CI01000004_04400735_04404462 ELOVL1A coding downstream 232173 4400422 ~ 4404786 (+)
CI01000004_04412723_04413196 NA coding downstream 243352 4411601 ~ 4413196 (+)
G27027 NA non-coding upstream 69328 4098327 ~ 4098718 (+)
G27025 NA non-coding upstream 85731 4080971 ~ 4082315 (+)
G27024 NA non-coding upstream 89460 4078271 ~ 4078586 (+)
G27023 NA non-coding upstream 90261 4077566 ~ 4077785 (+)
G27022 NA non-coding upstream 90648 4077102 ~ 4077398 (+)
G27133 NA non-coding downstream 152910 4321159 ~ 4321368 (+)
G27138 NA non-coding downstream 166796 4335045 ~ 4335330 (+)
G27146 NA non-coding downstream 187068 4355317 ~ 4355544 (+)
G27166 NA non-coding downstream 242195 4410444 ~ 4411305 (+)
G27159 NA non-coding downstream 267932 4436181 ~ 4436502 (+)
CI01000004_03550525_03552621 PTGER4C other upstream 615600 3550329 ~ 3553423 (+)
G26245 NA other upstream 645653 3509017 ~ 3522393 (+)
CI01000004_02745885_02768971 NA other upstream 1409108 2745885 ~ 2769135 (+)
G25992 NA other upstream 1431278 2736536 ~ 2736768 (+)
G25882 NA other upstream 1594997 2548075 ~ 2573049 (+)
G27805 NA other downstream 1204576 5372825 ~ 5373803 (+)
G28165 NA other downstream 1564340 5732589 ~ 5733001 (+)
G28302 NA other downstream 2301779 6470028 ~ 6502087 (+)
CI01000004_06571261_06572539 SEP15 other downstream 2402971 6570771 ~ 6572667 (+)
CI01000004_07654234_07655677 MRPL34 other downstream 3486523 7654234 ~ 7656383 (+)

Expression


Co-expression Network