G27027


Basic Information

Item Value
gene id G27027
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 4098327 ~ 4098718 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU30504
GTTTTGGTGTTGGAATTTGGTCCCATTCTTGCCTGCTATAGTTTTCCAGCTGCTGAAGAGTTCGTGGTTGTCTTTGACTTATTTTTCATTTAATGTTGCTCTAAAACCTTTATATACCTTTCAGCATTCATAGTGCCTTCCAAAACATGCAAGCTGCCCATACCGTATGCACTTATGCACCCCCATACCATCAGAGATGCTGGCTTTTGAACTGAACGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU30504 True 220 lncRNA 0.38 2 4098327 4098718

Neighbor

gene id symbol gene type direction distance location
CI01000004_04048829_04053849 NA coding upstream 43757 4045928 ~ 4054570 (+)
CI01000004_03934726_03935639 NA coding upstream 162457 3933685 ~ 3935870 (+)
CI01000004_03878083_03909016 NA coding upstream 189018 3878019 ~ 3909309 (+)
CI01000004_03814120_03839793 NA coding upstream 258520 3814051 ~ 3839807 (+)
CI01000004_03735876_03736152 NA coding upstream 361310 3735754 ~ 3737017 (+)
CI01000004_04123289_04123846 NA coding downstream 23906 4122624 ~ 4123963 (+)
CI01000004_04172679_04173047 PBX1 coding downstream 72936 4171654 ~ 4174352 (+)
CI01000004_04231304_04239652 NA coding downstream 132493 4231211 ~ 4240123 (+)
CI01000004_04315741_04317415 GLULB, GLULA, GLNA, GS02, GLUL, GS01, GS04 coding downstream 216058 4314776 ~ 4317616 (+)
CI01000004_04400735_04404462 ELOVL1A coding downstream 301704 4400422 ~ 4404786 (+)
G27025 NA non-coding upstream 16012 4080971 ~ 4082315 (+)
G27024 NA non-coding upstream 19741 4078271 ~ 4078586 (+)
G27023 NA non-coding upstream 20542 4077566 ~ 4077785 (+)
G27022 NA non-coding upstream 20929 4077102 ~ 4077398 (+)
G27020 NA non-coding upstream 26058 4063397 ~ 4072269 (+)
G27044 NA non-coding downstream 69328 4168046 ~ 4168249 (+)
G27133 NA non-coding downstream 222441 4321159 ~ 4321368 (+)
G27138 NA non-coding downstream 236327 4335045 ~ 4335330 (+)
G27146 NA non-coding downstream 256599 4355317 ~ 4355544 (+)
G27166 NA non-coding downstream 311726 4410444 ~ 4411305 (+)
CI01000004_03550525_03552621 PTGER4C other upstream 545881 3550329 ~ 3553423 (+)
G26245 NA other upstream 575934 3509017 ~ 3522393 (+)
CI01000004_02745885_02768971 NA other upstream 1339389 2745885 ~ 2769135 (+)
G25992 NA other upstream 1361559 2736536 ~ 2736768 (+)
G25882 NA other upstream 1525278 2548075 ~ 2573049 (+)
G27805 NA other downstream 1274107 5372825 ~ 5373803 (+)
G28165 NA other downstream 1633871 5732589 ~ 5733001 (+)
G28302 NA other downstream 2371310 6470028 ~ 6502087 (+)
CI01000004_06571261_06572539 SEP15 other downstream 2472502 6570771 ~ 6572667 (+)
CI01000004_07654234_07655677 MRPL34 other downstream 3556054 7654234 ~ 7656383 (+)

Expression


Co-expression Network