G27023


Basic Information

Item Value
gene id G27023
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 4077566 ~ 4077785 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU30500
GGCGGAACCACTTGAAAGCGATCATTTGTTTATATAAAGTGCATACATTTAAAATTTTTGGTAACACTTTATTTTAGGGTCTTTTAACTAGTTGCTTATTAGCATGCATATTACTAGTTTATTGGTTGTTTATTAGTACTTATTAAGCACATATTAATGCCTTATTCTGCATGACCTTATTCTACATTCTTAATCCTACCCAATACCTAAACATAACAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU30500 True 220 lncRNA 0.30 1 4077566 4077785

Neighbor

gene id symbol gene type direction distance location
CI01000004_04048829_04053849 NA coding upstream 22996 4045928 ~ 4054570 (+)
CI01000004_03934726_03935639 NA coding upstream 141696 3933685 ~ 3935870 (+)
CI01000004_03878083_03909016 NA coding upstream 168257 3878019 ~ 3909309 (+)
CI01000004_03814120_03839793 NA coding upstream 237759 3814051 ~ 3839807 (+)
CI01000004_03735876_03736152 NA coding upstream 340549 3735754 ~ 3737017 (+)
CI01000004_04123289_04123846 NA coding downstream 44839 4122624 ~ 4123963 (+)
CI01000004_04172679_04173047 PBX1 coding downstream 93869 4171654 ~ 4174352 (+)
CI01000004_04231304_04239652 NA coding downstream 153426 4231211 ~ 4240123 (+)
CI01000004_04315741_04317415 GLULB, GLULA, GLNA, GS02, GLUL, GS01, GS04 coding downstream 236991 4314776 ~ 4317616 (+)
CI01000004_04400735_04404462 ELOVL1A coding downstream 322637 4400422 ~ 4404786 (+)
G27022 NA non-coding upstream 168 4077102 ~ 4077398 (+)
G27020 NA non-coding upstream 5297 4063397 ~ 4072269 (+)
G27018 NA non-coding upstream 17332 4059917 ~ 4060234 (+)
G27013 NA non-coding upstream 34492 4042830 ~ 4043074 (+)
G27010 NA non-coding upstream 39016 4038283 ~ 4038550 (+)
G27024 NA non-coding downstream 486 4078271 ~ 4078586 (+)
G27025 NA non-coding downstream 3186 4080971 ~ 4082315 (+)
G27027 NA non-coding downstream 20542 4098327 ~ 4098718 (+)
G27044 NA non-coding downstream 90261 4168046 ~ 4168249 (+)
G27133 NA non-coding downstream 243374 4321159 ~ 4321368 (+)
CI01000004_03550525_03552621 PTGER4C other upstream 525120 3550329 ~ 3553423 (+)
G26245 NA other upstream 555173 3509017 ~ 3522393 (+)
CI01000004_02745885_02768971 NA other upstream 1318628 2745885 ~ 2769135 (+)
G25992 NA other upstream 1340798 2736536 ~ 2736768 (+)
G25882 NA other upstream 1504517 2548075 ~ 2573049 (+)
G27805 NA other downstream 1295040 5372825 ~ 5373803 (+)
G28165 NA other downstream 1654804 5732589 ~ 5733001 (+)
G28302 NA other downstream 2392243 6470028 ~ 6502087 (+)
CI01000004_06571261_06572539 SEP15 other downstream 2493435 6570771 ~ 6572667 (+)
CI01000004_07654234_07655677 MRPL34 other downstream 3576987 7654234 ~ 7656383 (+)

Expression


Co-expression Network