serpine1 (serpine1,LOC107666277,LOC107668101,LOC107593715,LOC107754656)


Basic Information

Item Value
gene id serpine1
gene name serpine1,LOC107666277,LOC107668101,LOC107593715,LOC107754656
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056705.1
NCBI id CM032074.1
chromosome length 41700998
location 15103357 ~ 15106612 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043245891.1
CGCGTCTGAAGGGGAGGGCTCAAGTCCTTTAAATAGAGACCGAGCTGCTCACAGACACATTAAGAACAGCTCTGGGGTTGCACTGCATCGAATATCAAAGTAACAAATTAAATCTACAAAGAAACTCTTCAGAATCAAAGCATCTTTCAGATATTCAAAATGCAGAGCCTGAATGTGCTGTTGATCTTTACCCTTTGCGGGTCAAGCTTGTGCAACCTCATGCAGGAGAAGCAGACAGATTTTGGGCTGCAGGTGTTCTCTGAATTAGTCCAATCTGCTCCGGACAGAAATCTGGTTCTCTCTCCCTATGGCATCTCTTCAGTGCTGGGCATGGCTCAACTTGGCGCCTATGGCAGCACTCTTAAAATGCTTTCCTCTAAGATGGGTTACTCACTGCAAGAACGCGGTATGCCAAAGCTACAGAGGCTTCTTCAGAGAGATCTGGCCAGTGAAGACGGAGTAGAAGTGGCCAGTGGTGTCATGGTTGACCGGAAGATAATTCTGGAAAAGGTATTTAGGCGCAGCCTGTCCAAAGCCTTCCAGAGCGTCCCTCACCAAATAGATTTCAGCCAACCAGAGATGGCCCGGCAGGTGATTAACTCCTGGACATCTGACCACACTGGTGGAATGATTTCTGACTTCCTCCCATCTGGGGTGTTGAGTGAACTGACACGCTTGGTCCTGTTGAATGCTCTCCACTTCCATGGGGTCTGGAAGACGCCCTTTGACCCTAAGCTTACTAGGGAACAGCTATTTCACAGAGTCAACGGCAGTGCTGTATCTGTTCCTATGATGACTATGACTTCAAAGTTCAACTGTGGTGAGTTTGTGACTGAAGACGGCGTGGACTATGATGTCATTGAGGTGCCTTATGAGGGCGAGTCGCTAAGCATGCTTCTGGTGATGCCATTTGAGAGGGATGTACCTCTGTTGGCCCTGAACAAAGAGCTGAGAAGCAGCAGAATTGAGGAATGGAGAAAAACAATGAGAAAGATTAACAAACAACTTTCTATTCCAAGGTTCTCAATGGACACAGAAACCGATCTGAAGCCCACACTGAGCAAGATGGGTCTTGGAGACATTTTCAGCCAGAGCAAAGCTGATTTCTCTCGCATTACCACCGAGGAACCTTTATGTGTATTCAAGGTCCTTCAGAGGGTAAAACTTGAGGTGAATGAAGAAGGAACCAAAGGCTCATCTGCCACAGCGGCTGTCATTTACTCTCGCATGGCCATAGAGGAGATCACACTGGATAGACCCTTCTATTTCCTCATTCAACACAAACCCACTGGTGCATTGTTGTTCAGCGGTCAAGTGAACCAGCCTCAGTAAAAATAACAGACCAAGGTTGTGCCTGAAGTGACCATTCGAACAGAAGGACCAAGGAAACTGCCAACAAGTCTGCACACAACATACTACTGAAGACAGGAGATGCTTAGGGTTCAGTTTTGCAATGAAAGatgcaaaaacttttatatttgtctTGGGAGCATAGCTTGAAGTGCcaaattttaataagaaatgtataaatgtttattcaGTGTGTCTACTGCTATAGGAGAGGAAAGgtatatactataaaaaaaagcattgctgtTTAAAACATATGTCTGAAACATCAGGGACATTTAATGATCAAAATTCACAGCCTAAGCAGATGGAGATTCTACATGCACTAATCATTTGAAGAGTGaattcatttgtgtgtttttgttttttaaaatctgtttaatgTGCTTATTTTTTACGAGTTggattttacagtatttattaatttattgtcgAAGGTTATATTTTCTTGAAGactgtttattaaaagtgtttcgtttttataataaaagcgACCATACGCGAACATGA

Function

symbol description
serpine1 Enables serine-type endopeptidase inhibitor activity. Acts upstream of or within negative regulation of plasminogen activation. Predicted to be active in extracellular space. Is expressed in heart. Human ortholog(s) of this gene implicated in several diseases, including artery disease (multiple); autoimmune disease (multiple); diabetic retinopathy (multiple); liver disease (multiple); and lung disease (multiple). Orthologous to human SERPINE1 (serpin family E member 1).

NR:

description
plasminogen activator inhibitor 1-like

GO:

id name namespace
GO:0006955 immune response biological_process
GO:0010951 negative regulation of endopeptidase activity biological_process
GO:0010757 negative regulation of plasminogen activation biological_process
GO:0005615 extracellular space cellular_component
GO:0004867 serine-type endopeptidase inhibitor activity molecular_function
GO:0008009 chemokine activity molecular_function

KEGG:

id description
K03982 SERPINE1, PAI1; plasminogen activator inhibitor 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043245891.1 True 1860 mRNA 0.43 9 15103357 15106612

Neighbor

gene id symbol gene type direction distance location
ap1s1 ap1s1,LOC107666294,LOC105921790,LOC103148860,LOC107593725,LOC108443977,LOC103385557 coding downstream 894 15094536 ~ 15102463 (-)
trnal-aag_31 NA coding downstream 70654 15032622 ~ 15032703 (-)
snapc2 LOC107666289,LOC107561849,LOC107750571 coding downstream 71229 15029093 ~ 15032128 (-)
ache ache,LOC107750572,LOC107678131,LOC107561856,LOC107749789,LOC107668174,LOC107593784 coding downstream 99348 14994497 ~ 15004009 (-)
zgc:92664 LOC107561866,LOC107594707,LOC107750573,LOC107749790,LOC107678180,LOC107668195 coding downstream 109213 14991315 ~ 14994144 (-)
zgc:77439 zgc:77439,LOC107561800,LOC107666303,LOC107750567,LOC107594687,LOC107754666,LOC108443975,LOC108268285 coding upstream 10138 15116750 ~ 15122280 (-)
trnas-uga_119 NA coding upstream 15198 15121810 ~ 15121891 (-)
trappc14 si:dkey-3k24.5,cunh7orf43,LOC107594676,LOC107754664,LOC107687048,LOC107561780,LOC105895567 coding upstream 54573 15161185 ~ 15174557 (-)
gal3st4 gal3st4,LOC107750564,LOC107561786,LOC107666295,LOC107593694 coding upstream 68428 15175040 ~ 15182797 (-)
her8a LOC107750660,LOC107563304,LOC107666285,LOC107754663,LOC107687047,LOC107593669,LOC108262021,LOC105027206 coding upstream 84936 15191548 ~ 15194056 (-)
G53121 NA non-coding downstream 148785 14952192 ~ 14954572 (-)
G53119 NA non-coding downstream 152723 14947805 ~ 14950634 (-)
G53118 NA non-coding downstream 158342 14943010 ~ 14945015 (-)
G53091 NA non-coding downstream 182479 14839197 ~ 14920878 (-)
G53276 LOC101886486,LOC101886504,LOC101886427 non-coding upstream 231464 15338076 ~ 15342768 (-)
G53307 NA non-coding upstream 393309 15499921 ~ 15503896 (-)
G53309 ext2,LOC107750554,LOC107586005,LOC107754691 non-coding upstream 402568 15509180 ~ 15509681 (-)
G53326 rps13,LOC107586033 non-coding upstream 502874 15609486 ~ 15611883 (-)
G53338 NA non-coding upstream 579019 15685631 ~ 15686068 (-)
rnaseka rnaseka,rnasek,LOC107750577,LOC107561913,LOC107678101,LOC107749794,LOC107594736,LOC107669181 other downstream 128189 14973703 ~ 14975168 (-)
G52917 LOC105896813 other downstream 958077 14144506 ~ 14145280 (-)
LOC122347917 LOC107738092,LOC107683518,LOC107548777 other downstream 1012916 14075543 ~ 14090441 (-)
G52897 LOC107558424,LOC107731920 other downstream 1029658 14069113 ~ 14073699 (-)
LOC122347915 NA other downstream 1034857 14065015 ~ 14068500 (-)
nrn1lb nrn1lb,LOC107750645,LOC107586039,LOC107594653,LOC107741430 other upstream 1453806 16560418 ~ 16564338 (-)
G53797 tpm1,LOC103462590 other upstream 1775281 16881893 ~ 16934252 (-)
serf2b NA other upstream 1939832 17046444 ~ 17048041 (-)
LOC122349446 arl14ep,LOC107663944,LOC107740492,LOC107554899,LOC107700465,LOC107755038 other upstream 3559661 18666273 ~ 18669833 (-)
G54312 LOC107663979,LOC107557712,LOC107740422,LOC107700467,LOC107553073,LOC107755077,LOC108430810 other upstream 3635548 18742160 ~ 18794207 (-)

Expression


Co-expression Network