G62215


Basic Information

Item Value
gene id G62215
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 8974097 ~ 8974345 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU92132
atataaataaacttttttgaaaGCCTGATGTGTAATTGATAAATTCatctaaaacattatatatggATAATCAAATACactaataaaatcaaatggTTGCTTCAGTCCATTAAGTGCTCATCCtgaaatattactaacaatatcattttcaacatttaccGTAATAATAAAGGTTTCACACCAAAAATACACATACCCAAAGCTGGGCATTTTTGgaattatataaaagtaacttTACTTGTATCTaat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU92132 True 249 lncRNA 0.26 1 8974097 8974345

Neighbor

gene id symbol gene type direction distance location
slc44a5b slc44a5,slc44a5b,LOC107657906,LOC107548439 coding upstream 1322 8942393 ~ 8972775 (+)
si:ch211-150o23.3 LOC107657905,LOC107710920,LOC107599813,LOC107743855,LOC107699767 coding upstream 55391 8913462 ~ 8918706 (+)
si:ch73-70k4.1 NA coding upstream 153835 8814073 ~ 8820262 (+)
dimt1l dimt1,dimt1l,LOC107699721 coding upstream 312613 8657288 ~ 8661484 (+)
cenph cenph,LOC107710910,LOC107743860,LOC107657872,LOC107699730 coding upstream 322029 8649995 ~ 8652068 (+)
erich3 erich3,LOC107710922,LOC107599815,LOC107657850,LOC107550342,LOC107699814 coding downstream 5031 8979376 ~ 8987554 (+)
LOC122350485 NA coding downstream 13309 8987654 ~ 8991208 (+)
lrriq3 LOC107585823,LOC107657910,LOC107710924 coding downstream 31784 9006129 ~ 9009507 (+)
ssbp3b ssbp3b,LOC107657912,LOC107710925,LOC107585824,LOC107699856,LOC108439398 coding downstream 44408 9018753 ~ 9029083 (+)
LOC122350046 LOC107657916,LOC107585827,LOC107699878,LOC100333406,LOC107710926 coding downstream 65254 9039599 ~ 9109833 (+)
G62106 NA non-coding upstream 321530 8587680 ~ 8652567 (+)
G62046 ndufaf2,LOC107743894,LOC107657848,LOC107752447 non-coding upstream 494409 8449053 ~ 8479688 (+)
G62045 LOC107599802,LOC107657894,LOC107743884,LOC107548279,LOC107699654 non-coding upstream 503261 8469057 ~ 8470836 (+)
G62064 NA non-coding upstream 507001 8465249 ~ 8467096 (+)
G62013 NA non-coding upstream 579354 8392378 ~ 8394743 (+)
G62216 NA non-coding downstream 53 8974398 ~ 8974669 (+)
G62231 dio1,LOC107700640 non-coding downstream 58174 9032519 ~ 9037868 (+)
G62314 obscna,LOC107657853,LOC107758262,LOC107585905 non-coding downstream 215710 9190055 ~ 9191320 (+)
G62381 NA non-coding downstream 288582 9262927 ~ 9264290 (+)
G62399 NA non-coding downstream 351734 9326079 ~ 9327293 (+)
smim15 smim15,LOC107700545 other upstream 495766 8477171 ~ 8478331 (+)
soat1 soat1,LOC107549691,LOC107700347,LOC107657858,LOC107758003 other upstream 1445011 7306119 ~ 7529086 (+)
G61713 LOC107550213,LOC107755291,LOC107599058,LOC107700515,LOC107757991,LOC107665059 other upstream 2124386 6848481 ~ 6849711 (+)
G61678 LOC107665067,LOC107598994,LOC107757984 other upstream 2207554 6756105 ~ 6766543 (+)
LOC122350084 atp2a2,LOC107757297,LOC107674294,LOC107566800,LOC107599024,LOC108444117 other upstream 3744489 5226952 ~ 5229608 (+)
G62483 fam78bb,LOC107717547,LOC107676968,LOC107585866,LOC107751100,LOC107550401,LOC107695225 other downstream 730136 9704481 ~ 9705639 (+)
col2a1a col2a1a,LOC107585898,LOC107668081,LOC107695274,LOC107549173,LOC107731244 other downstream 1374569 10348914 ~ 10367863 (+)
G62692 cry1ba,LOC107578471,LOC108441644,LOC107668038,LOC101164536,LOC108265656,LOC103358259 other downstream 1457457 10431802 ~ 10478799 (+)
fhad1 LOC107731229,LOC107695278,LOC107550056,LOC107667985,LOC107555592,LOC107745840,LOC107745827 other downstream 1561798 10536143 ~ 10551791 (+)
LOC122350428 LOC107668044,LOC107731208,LOC107555595 other downstream 2218379 11192724 ~ 11197803 (+)

Expression


Co-expression Network