CI01000005_02983417_02988517


Basic Information

Item Value
gene id CI01000005_02983417_02988517
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000005
NCBI id null
chromosome length 7630583
location 2983417 ~ 2988541 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000005_02983417_02988517.mRNA
GCAGCAAAAACGACTTCAGGCTGGGCAACGATACGCTACCACGGAGAAGAAAACTCCATCCACCCAGGGGGAAAGTCGAGAAGGAGGGGAGGCCCTGCAACACCGGAGTGTTGATGTTAGCGCTAATGCGCACTTGTTTAGCTCAGCTCGTGGCTTTTACCGCATTACTGGAGAAAAAGCAGCAAATTTTAGGGTGAAATATCCCTTCAATATAACACTTTCGGTTTTAGAAATGTTATATAATGAGGACGTATTTCAGAACGTAAGTCTTGTGGGTTTGGATCAGTATGAAGCTACCATGGTGGGTGAGCGCCGCAATGGCAACCTTCTGGTTCAGCTGGGCCCGAAGCTGCAGGCTTACCCAGAGGAGCTTATCCGTCAGAGGAGGACTCACGACGGCCAGACGGAGTATCTGATTCGCTGGAGCCTGCTGGCTGTGGATGATAGCAGCAGTTCAGGCTGCAGCAATGAGGCGAGCAGCGGTGGCGGAAGTAGTTCCGGTGGCGGTGGCTCTAGTGGCTCCACTTCAGGAGAAAGCAAGACTGAGAGCATCCTCATGTGGATGTCCACAGAAGACGTGTACGCCAACTGCCCCACTCTGCTAGGCAAGCGCAAGGCTGACTCCCAGAGGCCTCTGCTGGAGGAAGAGGAGCGGCCCAGCGGCCAGTTCCCCCCAGACGTCACCTTTGATGAGGGAGAACTGTTGGACATGAAAGATGACGTGAAGAATCTCGTCCGCCGTGCCCGGAAGCAAATGGCCAAGAACAGCGACTTCGGTATAAGCATCACGCACACTATCCACGTGCTGAGCGCCTATGCCAGTATCGGCTCTCTGGTAGGAGTCTTCAAGGAGACCGGTGCTCTCGACCTGCTCATGGAACTTCTCTGCAACAAGGAGCGACAGACCAGACGCAGCGCCGGCAAGATGTTGCGAGCCCTGGCTTCTCACGATGCGGACCGCAGCGCAAGTTTGAACCACAGCTTCCCGTCAGTGTGCTGTGAGATATTGGGTATTGTGAGTCATCAGCGATGGGCAGAGACAGTGGCTGTCTCAGCGCTCTCAGCATTGGCTGTTGGCAGTGTCTAAAAGGACCCTATAGGAGTAGATGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000005_02983417_02988517.mRNA True 1111 mRNA 0.54 5 2983417 2988541

Neighbor

gene id symbol gene type direction distance location
CI01000005_02867301_02880721 APMAP coding upstream 101795 2867301 ~ 2881622 (+)
CI01000005_02846022_02853830 PPM1G coding upstream 129587 2845685 ~ 2853830 (+)
CI01000005_02772221_02779729 FAM120B coding upstream 203443 2772112 ~ 2779974 (+)
CI01000005_02700297_02715015 PHF10 coding upstream 268402 2700297 ~ 2715015 (+)
CI01000005_02607747_02613729 NA coding upstream 369028 2606961 ~ 2614389 (+)
CI01000005_03011542_03041267 CUL9 coding downstream 23001 3011542 ~ 3042074 (+)
CI01000005_03054461_03082529 NA coding downstream 65920 3054461 ~ 3082784 (+)
CI01000005_03097346_03117235 ZNF318 coding downstream 108405 3096946 ~ 3117377 (+)
CI01000005_03167707_03171889 DNPH1 coding downstream 179166 3167707 ~ 3172020 (+)
CI01000005_03317813_03368502 TJAP1 coding downstream 327753 3316294 ~ 3369384 (+)
G37173 NA non-coding upstream 27886 2954656 ~ 2955531 (+)
G37165 NA non-coding upstream 47211 2935917 ~ 2936206 (+)
G37162 NA non-coding upstream 60163 2923016 ~ 2923254 (+)
G37161 NA non-coding upstream 61448 2921613 ~ 2921969 (+)
G37158 NA non-coding upstream 66779 2916439 ~ 2916638 (+)
G37015 NA non-coding downstream 57566 3046107 ~ 3052073 (+)
G37019 NA non-coding downstream 172405 3160946 ~ 3161256 (+)
G37208 NA non-coding downstream 212455 3200996 ~ 3201209 (+)
G37214 NA non-coding downstream 218954 3207495 ~ 3207730 (+)
G37222 NA non-coding downstream 227523 3216064 ~ 3216264 (+)
G36291 NA other upstream 1322385 1659733 ~ 1661032 (+)
G36223 NA other upstream 1445613 1503143 ~ 1537804 (+)
G35533 NA other upstream 2459636 491908 ~ 523781 (+)
G37392 NA other downstream 734203 3722744 ~ 3723503 (+)
CI01000005_04735429_04736817 COX20 other downstream 1746805 4735346 ~ 4737082 (+)
G39930 NA other downstream 4009003 6997544 ~ 6998340 (+)
CI01000005_07600541_07600974 NA other downstream 4609448 7600541 ~ 7602964 (+)

Expression


Co-expression Network