CI01000005_03054461_03082529


Basic Information

Item Value
gene id CI01000005_03054461_03082529
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000005
NCBI id null
chromosome length 7630583
location 3054461 ~ 3082784 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000005_03054461_03082529.mRNA
ATGGGGAAAAACCGTAAGCGTTTGAAAGGAAATGGGAATGCTCCAACACCTGGACCTGGACCACAGCATGGCATGCGTCCCACAGCACCAGGACCTCCTCCACCCAGACCCCCTCCTCCTCACGGCGGGTTTCGCGGTCCTGCTCCTGTCCGCCCGATGGGCCCACCTGGACAGAGGTTTCCTGGGCCCCATTGCGACTACGGGCCCCCAAACCCCAGAATGATGATGATGGATAACATGGAGGGGGATAGACGGTTTATGCATGAAACACAGGGATTCATGATGCACGATGAGCCTTTCCACCCGATGGATTTTCCTGACAGACATGAGTTCCGCCCGCCTTTTGATGGTCCTGATCCACGTTTCCAGCATCATTCAGAGTTTGGGAACAGACCACCAGAACCGCGGTTTTACCATCCAGAGCTTGAATGTGGACCGCGTTTCCGTTCTCCAGAGTTTTGTGAACGACCTCCAGACTTCTGCCCGCCTGAGTTTAATGACAGACCTCCAGACTTCTGCCCGCCTGAGTTTATGGGAAGACCCCCGAACTTCCACCCGTCTGAGTTTGAAAGCGGACCAGGTTTCCACAGGATGAACTCTGGATTCGACCAAATGGAGCAGTATGGTCCAAGAGACCCGCATTTTGTGCCACAGATGGATGTACATGGCAATCATGCATTTGGAGAAAGAGGAGGGTTTGCTGGACCTCCACTAGATTTCCGGGGCCCGGGTCCAGTGCAGCCACCACCTGAGGCGTTCAATGCCACTAGCATGCCTCCTCCTGGGAAAGCATTTCCACCCCAACCTCCAAAGAAAAAAGATCAGCTGGCAAAGACTGAACCTCCTAAATCAATGGCATCAAAGATATCAACGTTCAAAAATATATCTGCAAACACTCCTCGTGGACGCTCATTGGGAGTCATTTCATTTATTGGTAATAATTGTGGTTTCATTGAACGGGAGGATTTGAAGAAATTCTCTTTTGTTTTTGATGCCTTTTTTGGAAACCGAGCTCACTTGGTGCCTGGGGTTAAAGTGCATTTCACAGTAGTGAAAAATCTGGGAAAAGAATGTGCGGTTGACGTGAAAGTGGCACCAGGAGGAACAGACGACATTGACAGTACGGTGTATGAAGGCGTAGTTATCACAACCCTGCCTGATGGCAATGTCAAGGAAGTTAATCCTGGCTGCATCAGGACCATTATCTCTACGGATCCCATTAAACTGCCCTTCGGAAAAGCGGACACCGATATAACTCTGCTACTGTATGATCGTGTGGAGTTCCAGTTGCTGACAAATGTTATTACCAAGGAACAAAGAGCCACAAACATCAAACCTAAAACACCAGACACTTTTCAGCTCACCAAAGAAATCAGGGAGATGGGTGTGGTCATGAACAAGAGCGATGGAAGCCTGACAATCATGACAGAGAAACATAATAAGCTGACGGCTTCTGCTGCTGACCATTTATCAGATGATGAGCTGAATGTCATGGATGAAGTAGAGCTCACTGTTTTGACTGTGAATGACACAAAGAAGGCTGTCCGACTCAAAAAGCTGCCTGGGGGCTCTGTGACCTTTAATCAACAAGCAAGAAGCAATGAAAATATTTCTGGCTTAAAGGACAACGCATCTGGCACACCTGGCAAAGACAAGTGGAGGCCTGTGACCATGGAGGCTGGTTCTCAAGAGTCAGCTTTCTCCTTCGATGTAAGCAGTGAGAAATACGAGGGGATGATTGCCAGAATCGCCCCAAAGAAAAGCCCAACCCAAGAAAAGGAGCAGATGGACAAGCAAGAGCTCCCTTTGGGTCTTCTGGTCACCACAGTGGAGGGCACTGAGAAACGGTTATCTTTTAGGTCAGGTGACATGATCACAAAGGCCACCATGATGATCAGTGACAAGGTCCAGTTCAACATTTCCACCAACAGCGTAACCAAGGAGGAGTGGGCTGTCAATGTAGAGATCCTGCCAGAAACTTTCCAGACAGACTCTGAAGAGCAACGAAAGATAGGGCTTGTTGTCAAGCTGGATGATAATTTTGGGTTCATCAAGACACAACAGGACCCGCAGCTATTTTTTGACATAAATGAGGTTATGGAGGACACCAAACTCACTTTGTATGAGAAGGTTGAATTTACATTAGTACCGAAGAAAATGACCATCAAATTGCTGAAGGATCCAAAAGAACAAATCAAGGCAGAGGTCAAAACAGAGGACAAAAGCAGTGAATCCATGGATGTAGACAAGCCAAACAAGGGAAAAGACAAGGCATCTCCATCTTTGTCATCTGTAAAAGATCTGAAGAAGCAAAGTGAAATTAAACAAGAAAGGACCACAGCTAAAGGTGATAGAGCGCGGAGCAGAAGCAGGGAAAATAGTCGACGTAGGTATAGTCGAAGCAGGAGCAGAAGCAGAGAAAGTGGCAGACGCAGATATAGTCGCAGCAGAAGCCGGAGCCGAGACAGAAGCAGGAGCTACCACAGCAGATACCGAAGTTCCAGCCACGAGAGGAGGGACAGTCGATACAGACACAAACGCAGTCGCAGTCGTAGCAAAGAGCGCTCGGAGAGATACAGACGGAGTTGCAGTCGCAGCAGAAGCAGAGAAAGGAGCACCCAAAGTGCCAGGAAGAGAAGCCGCAGTCCAGCCGACAGATATGATCGCTATGCAAAACAAAGCAGTAGTAAAGATTCAAGCAACAAAAACAGAGCTAAAAGCCCTGATAATGTAGATGAAGAATTATTGAGAAAAAAGAGAGAGCTAATGGAACTCAATGAGATGATTGCACGCAAGAAAGCTATTGTTGCTATGGAGCAGAATGCAAAGAAAATTGAACCTGGGGTTGAGGTAGAGGGAAAAAGTGGAGTTACAACTTTTGATTATCAACATGTGCATCGTGAAAACGTGTGGATGCCTGACCTAAAACCGGTGAAGTCCATCTTGAAGAAACAGTCTGAACCTCACACTGATCCTCAATCTCAGGCTTCTGCAAGCAAGGAAACTACTGCTCCGTTTATAAAGAGTGAGAGTCAAGAGATGCAAATAGGATACCGTCAACAGACTAGTGCTTTTGGCTCAAATACACCTGGCTGCTCTACATTTGAAAGTAATTCTGAGAGGACTTTGAACACTGCATGGTCGGAGAAGATATCTTTACCTCAGATTGAGGATCCAGAATTGATTAGAAAAAAGAAGCAATTAGAAGAACTCAGTGAGTCCATAGCACGCAAAAGAGCTATATTTGCCTTGGAACAGAAGGTCAAAGTTGTTCGGGAAGTGCCAGAAGTGGAAGCAGAATATGAGTTTGACATGCACACAGATGAAAAATTTGTAATGTCTAAAGGAAACTTATGGAGCTCTGAAATAAAACCTGATGTTCAACCGAAAAAGTCCATTTTGAAGAAACGCTCAGAGATTTTCAGCTCTCAGAGTGACACAACCTCAGTTGATGAATATGGTCAACCATGTCAGGATGATTCTACTTTTGCAAAGATACTTTCTCAGACGCCAGCAGCTTCACCATTTAACAGGTCCTCAAATCCACGGCCTATTCATCCTAGTACTTTTGCCTTTTTCAAGCAGTTCATAAATGAGTCTTCAGCAGCCTCACAGGTGACTGGATCGCCTCCTTTTAACAAACTAGCAATCCCACAGACACTCGCACAAGCCTCCAGTTCAATGTCTTTGCATGACCAGAAATCTTCCAACTTGTCCAAAGGTAACAATTCTCATGATGACCAACAGAGGGCAACATCTCGCCAGCCTCATGACCATCCCCATAGCAGTAACGCTTCAACAAGTCAGACTTCACCATCAAGTCAAAATCGCAGTGTTACAACTCAAATGGAACGCTTCCTTAGTGCTCTCAACAAGGCTGACACCAGTGTTGTTAACTCATTGTTTCAAGAGGCAAGAAAGGATCTGGCTTCAATGAACACCAAGAAACCCACTCAACCACAATTAGATAGAAACATACCCTTCATGGATGAGATATATGATCCTTTTAAGGAAGATGAAGACAATGATCCGCCTTCCCTTATGGGTAAACATTCTGGCCCAGAACGAGTTAAAAACCCTGTGAAGATTGAAACCCGTTTGAATGACCCTAGCAAAGATGACCTCTTGCCTCATGAAAGAGCTGTTCAAGATGGTAGTGGCTTTTCTCAACTTGTTGGAATGAAGTATGGGGTAGACTCTACGGCAAAAGCTGAAAAGAAAAGTCCATATGGGCATCCGATGGTTTCAGAAAATTGGAGCATGCATAAAGATCCAAATCGGTTCTCTGAGCAATGGAATCAGTATGAAGAGGGTACTGATCCATATGCAACAGAGCATGAACATTACACTGATCACAATCTGTATAGGGAGCGTAGTCAGTCTGTTGAGTACCAGAAAGTCAATCCAAATGTCCTGCTTTCTTGCGTAGAGGACAGAGAGATGCCTGATAGTAGTTTTGACAAAAGCTTAGCTCGTCAGCAGTCCGAAGAAAGCAATGAAGATAAAGACAGAAAGTCAGAGAACTTTGAAAAGATTCAGAGTCTTCTACAGACAATAGGACTTCAACTAGACACAGCAGAGGTTAGCAAATTAGCAGACAGGACACAAGAGCGGTTGTATGGCAAGATGAGAAAACCTCATAGTGCATCTTCTCACTCCTTTGACCAAAGAAGGGAGCGATCGATGAGCCAATCTGAGCACAGGGGTAGTAGTAGTAGGGCAGATTCCTCAGACTCTGAAGGTGTCCGATCCGTTTCCCCAGCTCAGTCTTCGAATCGTAAGGTTTACATGAGCTATAAGGACTCTGTAAAATACAAAGAACAGAACAAAGTGGAAGAAGTAGACCTAACTAGCATTAAGAGAACCGTAGTGAATTTGAAACCAGCAATAGACAAACAAGATCCTTACGAAACTTCATCTGAGCCGACCGCAGCTTCTCAAGTTTCATTTCAGCCAGTGACCGGTTTAACCACAGTTCAACCAGATAGTTCCCAGTATGCCCAAACTTCCAATGTTCCCACCTTTTCAGCTTCACAATATTCACAATATCAAAGTGGTGATCTACAGTTTTGGGGTATGGCCCCTGGTCTGTACCCTTATGGCACTGTACCTCCATCCCCTACTCTAGGTTATGCTAGTGGTCTCCAAGCAATGGCTCCACAAATGATGGCTACTTATGGTTCGTACACTGCACAAATGGCCAATCCATATTGTGTGCCGCCTCCACTCTCCATGCAATATTCTTATGGTCCTCCACCTACTCACAACCCTCTCCACCTCTCCTCAGTGGGCTCTTCCTACGATAACAAAGCAGCTAAGCAAGTCCCAACAAAGCCTGTTAGATGCCTCAAAACAATAAAAACAGTCCAGACAGTTGAAACAGTTAATGCAGGGCCTGCCAGGGCACTTGTTAGCATACAGCCTACAGAGGACAATCAAGCAAAAAGTACATCAGAGGAAGCCAAGAGTAAACAGGTTGCTACCATTACAGAAGACGACATCAAGGCTAAGCAGAAGAAACGGCTTGAACAGTTTAACCAGAGAATGAAGCTGAAGAAAGAGCAGCAAATGGAAGCCCAGCGAGCACGTGGACAAAATCGGAATTCAGCTACAGGTAAAAGTTCCCCCAGTGAGATAAAGAATGTGTGGATATGTGGCCACTCTCTTGTGTTTTGGGCTGAGAAGAGGGCTACTTCCCCTGAGTATGGAGTGCAGTTGGGCATGCACCCAAACTGTGTGCGCATCTGGTGGAAGGGCGTGCAGGGCATGACGTGGCAACAGCTTGTACCTTTGCTGCACCAGCTCAAAGACAACTGGCCCAAACCTGATGTGCTTATAATCCACTTGGGTGGAAATGACATAAGCACAACTGCTCCAGAAGCCTTTTTTGAGACTGTGAAGAAAGATATGACCTCATTGAAGAGCATTTTCCCCCAGTGCCTGCCGGTGTGGTCCAGCATCCTTTCACGACAGTCCTGGAGGGGTACAGAAGATAGCAAAGAAATGGACATCATTCGTATGGCCATTAATGACAGCATACAAAAAATGATGCCAGAACTGGGTGGCTCTGCTTTGAGCCACAGCAACATAAAACCCACTTTGGGACACTACAGACCAGATGGGGTTCACCTTTCTGGGAAGGGCATTGATATCTTCAATCTCAACCTACAGGCTTTTTTGGAGAAATGGGAGCGTGAGACTAATAAGACAGAGACATGTAACCCATCAGTTTGAGATGAGGAAATTTCTTAAATGGTCATTTGTTTTGTTCAGCTAATGTAGCTGTCAACTTGTACAGTGCCATGTCTTTTGTTGATGTTTTTGTTTTTTGTAACTTCAAAATGTATTGTTATACAGCTTATGTCAAATGAAAGTAAATCAGATTTCTTTTCGATACATACAAATTACAAAAATATTTTGCAAGAATGTTAGACTTTTACTTGTTTGAGTTTTTACTTGTTCTGTTTTATACATTTAGTTTAATGACAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000005_03054461_03082529.mRNA True 6489 mRNA 0.45 18 3054461 3082784

Neighbor

gene id symbol gene type direction distance location
CI01000005_03011542_03041267 CUL9 coding upstream 12387 3011542 ~ 3042074 (+)
CI01000005_02983417_02988517 NA coding upstream 65920 2983417 ~ 2988541 (+)
CI01000005_02867301_02880721 APMAP coding upstream 172839 2867301 ~ 2881622 (+)
CI01000005_02846022_02853830 PPM1G coding upstream 200631 2845685 ~ 2853830 (+)
CI01000005_02772221_02779729 FAM120B coding upstream 274487 2772112 ~ 2779974 (+)
CI01000005_03097346_03117235 ZNF318 coding downstream 14162 3096946 ~ 3117377 (+)
CI01000005_03167707_03171889 DNPH1 coding downstream 84923 3167707 ~ 3172020 (+)
CI01000005_03317813_03368502 TJAP1 coding downstream 233510 3316294 ~ 3369384 (+)
CI01000005_03423676_03430312 NCOA4 coding downstream 340892 3423676 ~ 3430481 (+)
CI01000005_03447497_03448897 NA coding downstream 364403 3447187 ~ 3449983 (+)
G37015 NA non-coding upstream 2388 3046107 ~ 3052073 (+)
G37173 NA non-coding upstream 98930 2954656 ~ 2955531 (+)
G37165 NA non-coding upstream 118255 2935917 ~ 2936206 (+)
G37162 NA non-coding upstream 131207 2923016 ~ 2923254 (+)
G37161 NA non-coding upstream 132492 2921613 ~ 2921969 (+)
G37019 NA non-coding downstream 78162 3160946 ~ 3161256 (+)
G37208 NA non-coding downstream 118212 3200996 ~ 3201209 (+)
G37214 NA non-coding downstream 124711 3207495 ~ 3207730 (+)
G37222 NA non-coding downstream 133280 3216064 ~ 3216264 (+)
G37233 NA non-coding downstream 153188 3235972 ~ 3236283 (+)
G36291 NA other upstream 1393429 1659733 ~ 1661032 (+)
G36223 NA other upstream 1516657 1503143 ~ 1537804 (+)
G35533 NA other upstream 2530680 491908 ~ 523781 (+)
G37392 NA other downstream 639960 3722744 ~ 3723503 (+)
CI01000005_04735429_04736817 COX20 other downstream 1652562 4735346 ~ 4737082 (+)
G39930 NA other downstream 3914760 6997544 ~ 6998340 (+)
CI01000005_07600541_07600974 NA other downstream 4515205 7600541 ~ 7602964 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location