G139105


Basic Information

Item Value
gene id G139105
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 5330078 ~ 5330805 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU188315
gcctggacgaggacgcaagtttattttgccaccacgcacagtgaggaggatgataagagaaataaaaagttctccaaagctcactgttacagaattgcaacaaatggtagcttcttggggtcacaaagtctccaaaacaaccatcaggcgctatctacatgccaacaagctgtttgggaggcatgcacggaagaaaccatttctcactcacaatcataaacgcaaacgtttggagtttgctaagcggtactgggacttcaactgggaccgtgtgctttggtcagatgaaacaaagatagagctttttggcaacaaatgctctaagtgggtctggcgtaacacaagagctgagtatgcagaaaagcacctcatgcccactgtgaaatacggcgggggatcagtgatgctgtgggcctgtttctcttctaaaggccctgggaaccttgttagggtgcatggcatcatgaatgctctaaaataccaggacattttaaaacaaaatctggtggcttctgcccgaaagctgaagatgggtcgtcactgggtctttcagcaagataatgaccctaaacatgtggccaaatctacacagaaatggttcaccgcacacagaatcaagctcctcccatggccatctcagtccccagacctcaaccccattgaaaacctgtggggtgagctgaagaggagagtgcagaggagaggacccaggtcgttggatgatttag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU188315 True 728 TUCP 0.48 1 5330078 5330805

Neighbor

gene id symbol gene type direction distance location
LOC103027706 acvr1l,LOC108428902,LOC108267867,LOC107678695,LOC107602619,LOC107749086,LOC107721710 coding downstream 285069 5031419 ~ 5045009 (-)
LOC103027391 crlf1a,crlf1,LOC108428895,LOC107602622,LOC107678692,LOC107588877,LOC107690059 coding downstream 524411 4771793 ~ 4805667 (-)
LOC103039917 LOC103039917,LOC108428861,LOC107602632,LOC107749223,LOC108267126,LOC107721708,LOC107588920 coding downstream 562785 4761753 ~ 4767293 (-)
LOC103039099 wdr48,LOC103039099,LOC108428893,LOC108268031 coding downstream 581325 4738988 ~ 4748753 (-)
LOC103038044 coa1,LOC103038044,LOC108428892,LOC108267121,LOC107600219 coding downstream 602550 4723386 ~ 4727528 (-)
ccdc24 NA coding upstream 236379 5567184 ~ 5598775 (-)
b4galt2 b4galt2,LOC107700994,LOC107557142,LOC107599894,LOC107657457 coding upstream 294054 5624859 ~ 5898800 (-)
LOC103034342 NA coding upstream 646462 5977267 ~ 5997977 (-)
LOC111194226 NA coding upstream 690293 6021098 ~ 6022596 (-)
LOC103029970 NA coding upstream 872003 6202808 ~ 6205849 (-)
G139098 NA non-coding downstream 11262 5318574 ~ 5318816 (-)
G139073 NA non-coding downstream 54039 5209187 ~ 5276039 (-)
G139052 NA non-coding downstream 295885 5032128 ~ 5034193 (-)
G139040 NA non-coding downstream 301373 5027920 ~ 5028705 (-)
G139043 NA non-coding downstream 323787 5005492 ~ 5006291 (-)
G139108 NA non-coding upstream 11676 5342481 ~ 5342814 (-)
G139110 NA non-coding upstream 14024 5344829 ~ 5346034 (-)
G139149 LOC108415780 non-coding upstream 110981 5441786 ~ 5442427 (-)
G139150 NA non-coding upstream 111751 5442556 ~ 5442906 (-)
G139155 NA non-coding upstream 124941 5455746 ~ 5456022 (-)
G139074 NA other downstream 53610 5276106 ~ 5276468 (-)
LOC103034146 zgc:110366,LOC108267892,LOC108437513,LOC105007548 other downstream 991881 4330871 ~ 4338197 (-)
LOC103047802 pcolce2a,LOC108437522,LOC108268019 other downstream 1468722 3847722 ~ 3861356 (-)
G138708 NA other downstream 1496408 3832721 ~ 3833670 (-)
gipc2 gipc2,dnajb4,LOC108430720 other downstream 2154725 3156750 ~ 3175353 (-)
G139489 NA other upstream 678248 6009053 ~ 6010867 (-)
LOC111194281 NA other upstream 691804 6022609 ~ 6054733 (-)
G139487 NA other upstream 974164 6304969 ~ 6374709 (-)
G139587 NA other upstream 1086580 6417385 ~ 6430319 (-)
lamc1 lamc1,LOC107658363,LOC107563558,LOC107678923,LOC107557259,LOC107722047,LOC106599430 other upstream 1234098 6564903 ~ 6689723 (-)

Expression


Co-expression Network