G43357


Basic Information

Item Value
gene id G43357
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 3739097 ~ 3739747 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU49214
ATTTAACATTTAATTGTTGCAGGTTTGCATAATGTTCTGAGTTTGCATTTCACTGTTTTTATTCATTTTAAGGAATACTGAAGTTTTTTGCTCAAGTGAGATGAGTAAATGCATGCTCACATTTAGTCTAGAACTACAATAACCATCTGTTCACACAGTGCACACAATGCCTCTGCACTTCCTGATTTCTCTCAACATGGGGACAAGAGAGCTGTCAGTCAAATAGGAAAATTAAGTAACTTAAGTAATAAGTAACGCTACTTATTTGAAAAAGTAACTTTCTTATATTTTCTTATAAATTTAAAAGTAATGTGTTACTTTAGTTACTTAAAAAAGTAATCTGATTACGTAGCTTGCGTTACTTGTAACGCGTTACGCCCAACATTGCAGATTGATTGTTCATATATCATTCGCCTGTTTTATATAACATTTTTATTTCCTAAAAACATAGTGAAAATGCCCTCATGTTGTTCCAAACCTGTAAGACCTTCGTTCATCTTCATCTTCGGAACACAAATTAAGATATTTTT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU49214 True 530 lncRNA 0.32 2 3739097 3739747

Neighbor

gene id symbol gene type direction distance location
CI01000006_03721474_03728658 NA coding downstream 9548 3719987 ~ 3729549 (-)
CI01000006_03631937_03713404 PC, PCX, PCXB, PCXA coding downstream 25693 3631937 ~ 3713404 (-)
CI01000006_03571836_03607035 PC coding downstream 131950 3571408 ~ 3607147 (-)
CI01000006_03555987_03560997 FKBP2 coding downstream 178100 3555641 ~ 3560997 (-)
CI01000006_03451569_03452222 BADA coding downstream 285631 3451386 ~ 3453466 (-)
CI01000006_03771304_03775923 NA coding upstream 31277 3771024 ~ 3776132 (-)
CI01000006_03782744_03792823 ESRRA coding upstream 42952 3782699 ~ 3793284 (-)
CI01000006_03814498_03821222 NA coding upstream 74686 3814433 ~ 3821222 (-)
CI01000006_03841667_03847765 STX5AL, STX5 coding upstream 101574 3841321 ~ 3847765 (-)
CI01000006_03850934_03852259 NA coding upstream 111187 3850934 ~ 3852304 (-)
G43339 NA non-coding downstream 201881 3536955 ~ 3537216 (-)
G43338 NA non-coding downstream 202771 3536048 ~ 3536326 (-)
G43337 NA non-coding downstream 203764 3534971 ~ 3535333 (-)
G43336 NA non-coding downstream 204976 3533528 ~ 3534121 (-)
G43335 NA non-coding downstream 207658 3529329 ~ 3531439 (-)
G43360 NA non-coding upstream 36474 3776221 ~ 3776452 (-)
G43368 NA non-coding upstream 66889 3806636 ~ 3806849 (-)
G43378 NA non-coding upstream 121734 3861481 ~ 3861708 (-)
G43377 NA non-coding upstream 122298 3862045 ~ 3862514 (-)
G43379 NA non-coding upstream 123366 3863113 ~ 3863338 (-)
G43102 NA other downstream 805113 2908451 ~ 2933984 (-)
CI01000006_02624725_02626124 COX8A other downstream 1112911 2624436 ~ 2626776 (-)
G42934 NA other downstream 1156891 2523776 ~ 2582206 (-)
CI01000006_02285649_02294759 NA other downstream 1444099 2284994 ~ 2296494 (-)
G42667 NA other downstream 1848341 1888988 ~ 1890756 (-)
G43549 NA other upstream 612763 4352510 ~ 4355428 (-)
CI01000006_04560607_04560993 NA other upstream 819762 4559509 ~ 4562068 (-)
CI01000006_06974359_06976736 NA other upstream 3233477 6973224 ~ 6976872 (-)
CI01000006_07500281_07507754 NA other upstream 3763398 7500246 ~ 7507976 (-)
CI01000006_10453630_10483241 NA other upstream 6743109 10453613 ~ 10484006 (-)

Expression


Co-expression Network