LOC103032665 (LOC103032665,LOC108434836,LOC106608812,LOC107595334,LOC107753995,LOC107659717,LOC107750788)


Basic Information

Item Value
gene id LOC103032665
gene name LOC103032665,LOC108434836,LOC106608812,LOC107595334,LOC107753995,LOC107659717,LOC107750788
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 39812532 ~ 39815068 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007250158.3
ACCCATTTCTTACAAATACCATCTGTAATACTGAATCCAGTATTCTAACCTTTTTTCCACTTATAGTCATGTAGACATACGGCTTCTGTTTTGCATAGTAAATTTTAAGTGACATTTGTATATAGTACTATATGGAAGTAGAATAGTGATAGAAATTATATGGACAAATGTCAGGATATATATTGGTAGGAAAACACATGAAAATTAACACCAAATGCACAATATCCAGGTCAGTGTCTCTAAAGTACCAGCATCTAATCTATCAGCAAATGATCCGTGATGACGTTCTCCTCACCGGCCAATTCAAGTGGTTCAATTTCAGTTTGCTTATAATTTACATAAGAACTCATGCCTTCAAAGTACACCTCTGATAATATTCAGAACAAGCCAATGGTTGTGTGCTCCCTCCACCTATGAGGAGAGAGCGAGTAACACTATACGATTATAGACTGAGTACAGAGATAGTGGGAGGATGAGTGACAGTAGATTTTACATATGCTCCTGTCATTTTACCAGTAGCTCTGGTAACAGGGACACAGAGATACAGTCCCAGTCTAGGTTAAAACATATCCGCAGAGGTTTGAGAGGTTAAATAGTAGGTAAAGAACTGAACTGAGCAGCTTATCATGAGGCACACTTTTTCACCTCTCTCACACTTTGTCTTGTGGGCAGTTTTAATCTTGTACGTGCAGGCCGCCGTCGTGGATGACTTCAACCATATTGAACGCTGTAAGGACTCTCTCTACATGGGTACTCCACCTCGAGGGTACCTTAGCAACTCTCTAAAGAAGATATGTCAACGTTACGAAGACCAACCACGCTTCATCACCCTCTATGACCCTCAGAAACACATCCCTATCTACTCTGCTTATACGTTTAAGAAGTCGGACGGGGAGAAGAGAGTGGACTTTCCTTGGATGTTTGAACCACAGCTGGCTTCTGACAAGGCCAGCGGTAACATGGAGCCCTTCCCCCAGTCGTCTCTCATGCATAAGAACTTTGAGGACACACAGGCCGTTCTGGACGACTACGCTGACGTGGTCCAGTATGAACGTGGCCAACTGAGCCCAGACCAGCACCAGGCTGACCCAATGGACAAAGCTGCCACCTACACTCTGACCAATGTGGTGCCTCAGATTAAAGAGTTCAGTGTCGGGCCTTGGGCTGCACACGAGCAGCTGATTCGCAAGCGACTCAACAACTACTGCAGAGGAAAGTCCTACATCATCACAGGGGTCACGACCTCCGGCAACACAATCCGCCGTGATAACTTAGACCGTGTGGCTATACCTGAGTACATGTGGACTGCTTACTGCTGCACAGACTACGATCACAATGCACCATATTCAGAGCGCTACAAGTTCCCTGTGTTTGGGGCCTATGGACTTAATGATCGCATCAATAATAACATAGTGGAGGTCCCTGTTAAGAGTCTAGAAAAGTTTCTGAGACTCAGAATGAATGTTGACAAGAACTTTCAGATCTTTTATAAGGACTGTGTCTCAGACTAATAAGGTGTTAAAAAATTATGTGACTGcattataatatttgtatttatatatcacTCTCCAGTCATACATAGCTTATAGCACTTATTTGATGACTATAAATAAGAGTAACAGACAAACTATAATTGTTGGATCAGTTGAATtggaaaaatctgcttttagtcACAGTGCAATTCATTACAGATAACACAAAAACTcaactcaatcattttaaacactaCATTTCAACCACCTCCTCTATGcctttaactgttttaattgattttcaATACTTTTaagtt

Function

NR:

description
endonuclease domain-containing 1 protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007250158.3 True 1789 mRNA 0.42 2 39812532 39815068

Neighbor

gene id symbol gene type direction distance location
LOC103027097 LOC108434835,LOC106608815 coding upstream 253 39809544 ~ 39812279 (+)
LOC103027388 NA coding upstream 5721 39804898 ~ 39806811 (+)
LOC107197636 LOC107197636,LOC108434818 coding upstream 11578 39798024 ~ 39800954 (+)
urgcp NA coding upstream 22115 39779532 ~ 39790417 (+)
nlgn2 nlgn2,nlgn2a,LOC103033407,LOC107664280,LOC107564776,LOC107659731,LOC107750775,LOC107753966 coding upstream 35598 39528422 ~ 39776934 (+)
epo epo coding downstream 20102 39835170 ~ 39844320 (+)
gigyf1 gigyf1 coding downstream 34891 39849959 ~ 39888152 (+)
wrap53 wrap53 coding downstream 82213 39897281 ~ 39913353 (+)
LOC103029815 NA coding downstream 100275 39915343 ~ 39926934 (+)
efnb3 efnb3,efnb3b,LOC107597046 coding downstream 114206 39929274 ~ 40045524 (+)
G147771 NA non-coding upstream 77302 39734891 ~ 39735230 (+)
G147747 NA non-coding upstream 179780 39632499 ~ 39632752 (+)
G147711 NA non-coding upstream 320915 39490582 ~ 39491617 (+)
G147702 NA non-coding upstream 400340 39411544 ~ 39412192 (+)
G147669 NA non-coding upstream 548369 39262808 ~ 39264163 (+)
LOC107197641 NA non-coding downstream 73142 39888210 ~ 39896073 (+)
G147844 NA non-coding downstream 160801 39975869 ~ 39998122 (+)
G147831 NA non-coding downstream 175898 39990966 ~ 40050330 (+)
G147846 NA non-coding downstream 182085 39997153 ~ 40092387 (+)
LOC111194400 NA non-coding downstream 655229 40470297 ~ 40506590 (+)
G147592 NA other upstream 661332 39147599 ~ 39151200 (+)
G147496 NA other upstream 1197177 38614878 ~ 38615355 (+)
c16h4orf48 cunh4orf48 other upstream 2770305 37038935 ~ 37042227 (+)
acap1 acap1,LOC107595305,LOC107731905,LOC107683535,LOC107675497 other upstream 3093245 36690693 ~ 36719287 (+)
G146805 acadvl,LOC107731915,LOC107595296,LOC107675499 other upstream 3318075 36491512 ~ 36494457 (+)
c16h20orf27 cunh20orf27,c7h20orf27,si:ch211-74f19.2,LOC107755635,LOC107697474 other downstream 852172 40667240 ~ 40694778 (+)
G148036 NA other downstream 946330 40761398 ~ 40787138 (+)
LOC103041218 LOC108411459,LOC108267979 other downstream 1021256 40836324 ~ 40870513 (+)
LOC107197094 NA other downstream 1079476 40894544 ~ 40902605 (+)
LOC103036120 NA other downstream 1182010 40997078 ~ 41000503 (+)

Expression


Co-expression Network