G89805


Basic Information

Item Value
gene id G89805
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035906.1
NCBI id CM008309.1
chromosome length 35377769
location 10685657 ~ 10686056 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU120818
CACTCCTTTGCACCTCTCGGATCACTACTTCATGAAACTCAATATTCATATTTCAAACAAACCCACGGCTACTCCTACGatggtctcgttccgccgaaatTTACGAGATATCTCAGCAGACCAGTtctcctcgctggtgactgacaacATGCCCCcaccaggctcattttcatcactcaatgtaaatgatgccaccgatacactctgctccacactaagctcctgtttggacaacctctgtcctcttacatctcgagccattagctctagcaaaccgcagccatggctcaAAAATAACTCACTGAGGGAACTACGTtccaaactccgagctgccgaaagaaaatggcataaaaaccaaaaacaagcagacctaaaaaactaccaactgctcctggcttcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120818 True 400 TUCP 0.47 1 10685657 10686056

Neighbor

gene id symbol gene type direction distance location
scnm1 LOC107732464 coding upstream 21707 10659675 ~ 10663950 (+)
tnfaip8l2 tnfaip8l2,LOC106605333,LOC107587822,LOC107741744,LOC107689840 coding upstream 30702 10635934 ~ 10654955 (+)
LOC103038777 LOC108262134,LOC108441933,LOC107741773,LOC107587875,LOC107689897,LOC105901617 coding upstream 53451 10617522 ~ 10632206 (+)
LOC103023172 si:dkey-27n14.1,LOC108428912,LOC107749301,LOC107685608,LOC107596760,LOC107678125 coding upstream 472976 10206563 ~ 10212681 (+)
LOC111193325 LOC106515060 coding upstream 580541 10101550 ~ 10105116 (+)
hormad1 hormad1 coding downstream 59295 10745351 ~ 10752631 (+)
LOC103043511 LOC108441921,LOC108268121 coding downstream 135334 10821390 ~ 10839317 (+)
LOC103043004 LOC108441920,LOC108272705 coding downstream 157556 10843612 ~ 10862180 (+)
LOC103042489 LOC108441919 coding downstream 188226 10874282 ~ 10883789 (+)
s100a1 s100a1,LOC103041356,LOC108441918,LOC108272706,LOC107587912,LOC107689908 coding downstream 203954 10890010 ~ 10891699 (+)
G89804 vps72 non-coding upstream 593 10683998 ~ 10685064 (+)
G89801 tmod4,LOC107663362 non-coding upstream 11479 10672719 ~ 10674178 (+)
G89802 tmod4,LOC107732465,LOC107663362 non-coding upstream 19646 10665390 ~ 10666011 (+)
G89624 rpl18 non-coding upstream 231778 10089884 ~ 10453879 (+)
G89667 NA non-coding upstream 383280 10249309 ~ 10302377 (+)
G89808 NA non-coding downstream 5305 10691361 ~ 10691561 (+)
G89809 NA non-coding downstream 7000 10693056 ~ 10693371 (+)
G89810 NA non-coding downstream 8380 10694436 ~ 10694720 (+)
G89811 NA non-coding downstream 10125 10696181 ~ 10735964 (+)
G89819 NA non-coding downstream 24425 10710481 ~ 10716602 (+)
iffo1 iffo1 other upstream 684743 9975197 ~ 10000914 (+)
G89453 NA other upstream 1075403 9602771 ~ 9610254 (+)
sumo1 NA other upstream 2436223 8242319 ~ 8249434 (+)
LOC111193322 NA other upstream 2605629 8077097 ~ 8080028 (+)
G88849 NA other upstream 3105697 7578610 ~ 7579960 (+)
G89806 NA other downstream 2210 10688266 ~ 10688820 (+)
LOC103044517 onecutl,LOC108441924,LOC107732477,LOC108268128,LOC107741751,LOC106580869,LOC107663311,LOC107689849 other downstream 94046 10780102 ~ 10791128 (+)
LOC111193328 NA other downstream 217627 10903683 ~ 10907172 (+)
LOC103025787 LOC103025787,LOC100536175,LOC107587908 other downstream 1449223 12135279 ~ 12138862 (+)
G90199 cct3 other downstream 1468841 12154897 ~ 12156862 (+)

Expression


Co-expression Network