G94285 (etfb,LOC103477870)


Basic Information

Item Value
gene id G94285
gene name etfb,LOC103477870
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035906.1
NCBI id CM008309.1
chromosome length 35377769
location 29518512 ~ 29530828 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU126855
aaagaaaacaagttcatattcataaagtttagtttagagtttagaaatcaatatttggtggaataaccctggtttttaatcacagtttaatcactcctccaccagtcttagacactgcttttggatacctttatgttttatactcttggtgcaaaaatttaagcagttcagtttggtggtttgatggcttgtgatcatccatcttcctcttgattatattccacaggttttcaatgtggtaaaatcaaagaaactcatcattttttggatatcttttattttttccagagctgtatatatgcaaaaaaaataattttgtatctGGACAGAATCTGGATCTACTTTGATCAGATTTCGTGGCGTTTTCTGTCGTTAACATGCTTTTTATATCAATGCtaggcttttttttgtttttgagaaTAACTAAACCCCATTCTTACCCCAGTgctgctcctcctcctgctgcctCTAGATCCTCCCCGCCTCCTTCAGTTTCCCCACCAGATCCTCCACCGTCTCCACCTTCACTCCAGCCTGCCTCTGCGCAGGCTCCTCCACCCGCAGCACCTCCAGCCGGGAGGTCAGGTCCACGCCCAGCTCTCCGGGCTTCACGCTGgcaatcttcttcttcttagcTTTCATGATGTTGGGCAGTGTGGCGTATCTGGGTGTATTGAGGCGAAGGTCAGCCGTCACCACCGCTGGCATATTAATCTTAATGGTCTCCAGTCCACCGTCGATCTCACGGATCACCTTAATTTTATCACCATCGATTGTGACCTCCGATGCAAACGTGAGGCCAGTCCAAAAGGGCTGCAGTCATCTGACCCGTCTGATTACAGTCGTCATCAATAGCTGTTTCCCGAGGATGACGAGGGATGCCTCCTCTTTCTTGGCCAGAGCTGCGAGGATCTTGGACACCTGCAGGGGTCCGAGTGTGTCGTAGTCTTTTCCAGAAACTTCCACGTGAATCCCGCGGTCTGCTCCCATAGCCAGAGCTGTACGAATGGTCTCCTGCACTTGCTGAGGTCCACAGCTGACCGCCACCACCTCCTTCACCAGCTTCTTCTCCTTCAGCCGGACGGCCTCCTCCACCGCGATCTCACAGAACGGGTTCATCGAGTGTTTCACGCCATCTGTGACCACTCCAGTGTTATCAGGCTTCACTCGGATCTGCCAACAGTCAGACCCAACACTGCTGCTTGGTCGAGGGTCCAGACtggctctcgctctctcgctttctcGTGATTGAGTGTGTTAATTGGTGAGTAGGTGGTGAACAGTTTGAGAGGAAGAGGGCAGAAATCGTCTCAGGTCAGACTACTATACAATACACTTCATCAGCTGACAGGATCCAGATCAAACAGGAGAGATCTGATCCTggcctgaaaaaaaacaatcaatcaatacaGCTATAGTGCAAGGGTCCGGACTGTTCATCATGAAGAAATTGTATTATCAGGTGCTATTCAGATAACactatttagtta

Function

symbol description
etfb Predicted to enable electron transfer activity. Predicted to be located in mitochondrial matrix. Human ortholog(s) of this gene implicated in multiple acyl-CoA dehydrogenase deficiency. Orthologous to human ETFB (electron transfer flavoprotein subunit beta).

NR:

description
PREDICTED: electron transfer flavoprotein subunit beta

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU126855 True 1490 lncRNA 0.47 6 29518512 29530828

Neighbor

gene id symbol gene type direction distance location
LOC103037974 LOC103037974,LOC108410974 coding upstream 102400 29408513 ~ 29416112 (+)
LOC111193298 LOC108410972 coding upstream 132326 29377574 ~ 29386186 (+)
LOC103023440 NA coding upstream 144624 29353773 ~ 29373888 (+)
LOC111193370 LOC107395558 coding upstream 292491 29222789 ~ 29226021 (+)
LOC103027516 NA coding upstream 314697 29199757 ~ 29203815 (+)
LOC103030628 NA coding downstream 6258 29537086 ~ 29587218 (+)
iglon5 iglon5,zgc:110372,LOC107671460,LOC107707642,LOC107733024,LOC106582734 coding downstream 243432 29774260 ~ 30150516 (+)
LOC103023025 fmnl1 coding downstream 951461 30482289 ~ 30560811 (+)
LOC103022402 NA coding downstream 1285789 30816617 ~ 30851185 (+)
LOC111193310 NA coding downstream 1339908 30870736 ~ 30875018 (+)
G94268 lim2,LOC102215845,LOC107379310,LOC100699404 non-coding upstream 57101 29455418 ~ 29461411 (+)
G94262 NA non-coding upstream 95511 29422701 ~ 29423001 (+)
G94256 NA non-coding upstream 127344 29390912 ~ 29391168 (+)
G94243 NA non-coding upstream 170104 29313219 ~ 29348408 (+)
G94234 NA non-coding upstream 170604 29347353 ~ 29347908 (+)
G94292 NA non-coding downstream 18559 29549387 ~ 29550380 (+)
G94421 NA non-coding downstream 144776 29675604 ~ 29676012 (+)
G94427 NA non-coding downstream 222362 29753190 ~ 29790589 (+)
G94434 NA non-coding downstream 260550 29791378 ~ 29842498 (+)
G94446 NA non-coding downstream 361692 29892520 ~ 29894683 (+)
G94241 NA other upstream 135214 29382555 ~ 29383298 (+)
G94233 NA other upstream 152856 29270303 ~ 29365656 (+)
LOC103044382 NA other upstream 171670 29251033 ~ 29346842 (+)
LOC103021747 rheb,LOC107653878,LOC106590380 other upstream 192487 29209278 ~ 29326025 (+)
hamp hamp other downstream 95747 29626575 ~ 29631034 (+)
LOC103021358 NA other downstream 920750 30451578 ~ 30461728 (+)
LOC103032422 atg9b,LOC107717223,LOC102789368,LOC105893796,LOC107599667 other downstream 1446358 30977186 ~ 31001046 (+)
LOC103022800 zgc:92591,LOC103022800,LOC108429172,LOC108260489,LOC107690974,LOC107554735,LOC105895240,LOC105019623 other downstream 1734038 31264866 ~ 31266990 (+)
LOC103045891 nradd,LOC108411964,LOC107581538 other downstream 2059119 31589947 ~ 31610978 (+)

Expression


Co-expression Network