G94243


Basic Information

Item Value
gene id G94243
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035906.1
NCBI id CM008309.1
chromosome length 35377769
location 29313219 ~ 29348408 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU126800
aaacaaaaaaattatttccaaGTAtgacatctggatctgatacacagttcagaagattcagcACCTtctgtctgaacccacttttagtttaatataattcagtatacttataaatacttatttccaaatatacttttgtacatttttagcaaactgtgttaaaaacaactgttactgtagttcacttaaacatatcgtaactttttaaaaagtaaattaaattactacattggtaaaatgtttttaaaatatatttaggtaatgtaaaaaaacaacatacagtacatgttaaaattaaaaaattgcttttagagatcttttatctgcttcatgttgtcagacaggttctatttaagtgatttcttgattctacaggtctggcagtaatcaggcctggttgtgtttagtagtgaaattaaactcagctttccaaacaaattacagttaattcagtttaaaatcaaatctgctttttattattatttactcaggttatctgtttttgtttgtttgataatatgaaaaatgtaagtatgacaaaaaaaaggaaaacaaattaaatctgTGAAGTTGCAAATAAGCAGCTGTTGTTGTATTTGTTGTTGTAATGTTGTTGAAATATTACTCTAAGTAACTGTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU126800 True 639 lncRNA 0.27 3 29313219 29348408

Neighbor

gene id symbol gene type direction distance location
LOC111193370 LOC107395558 coding upstream 87198 29222789 ~ 29226021 (+)
LOC103027516 NA coding upstream 109404 29199757 ~ 29203815 (+)
LOC103022075 LOC108432749 coding upstream 121523 28873542 ~ 29191696 (+)
LOC103025501 lrrc30,lrrc30a,LOC103025501,LOC108432734,LOC107579084,LOC107566920 coding upstream 463806 28846499 ~ 28849413 (+)
LOC103026119 arhgap28,LOC108432752 coding upstream 558980 28697092 ~ 28754239 (+)
LOC103023440 NA coding downstream 5365 29353773 ~ 29373888 (+)
LOC111193298 LOC108410972 coding downstream 29166 29377574 ~ 29386186 (+)
LOC103037974 LOC103037974,LOC108410974 coding downstream 60105 29408513 ~ 29416112 (+)
LOC103030628 NA coding downstream 188678 29537086 ~ 29587218 (+)
iglon5 iglon5,zgc:110372,LOC107671460,LOC107707642,LOC107733024,LOC106582734 coding downstream 425852 29774260 ~ 30150516 (+)
G94238 NA non-coding upstream 11384 29261437 ~ 29301835 (+)
LOC111193371 NA non-coding upstream 230955 29072604 ~ 29082264 (+)
G94148 NA non-coding upstream 650134 28660365 ~ 28663085 (+)
G94147 NA non-coding upstream 650903 28656373 ~ 28662316 (+)
G94145 NA non-coding upstream 657265 28655407 ~ 28655954 (+)
G94256 NA non-coding downstream 42504 29390912 ~ 29391168 (+)
G94262 NA non-coding downstream 74293 29422701 ~ 29423001 (+)
G94268 lim2,LOC102215845,LOC107379310,LOC100699404 non-coding downstream 107010 29455418 ~ 29461411 (+)
G94285 etfb,LOC103477870 non-coding downstream 170104 29518512 ~ 29530828 (+)
G94288 NA non-coding downstream 175959 29524367 ~ 29524950 (+)
LOC111193374 NA other upstream 56655 29256178 ~ 29256564 (+)
LOC111193309 l3mbtl4,LOC108432753,LOC107698702,LOC107570871,LOC107728988,LOC107653885,LOC106590345 other upstream 1373286 27919092 ~ 27939933 (+)
G93753 NA other upstream 2364340 26948463 ~ 26948879 (+)
LOC103034726 LOC108436089 other upstream 2920784 26267493 ~ 26392435 (+)
G93185 LOC105900568,LOC101883708 other upstream 3999512 25311877 ~ 25313707 (+)
G94241 NA other downstream 34147 29382555 ~ 29383298 (+)
hamp hamp other downstream 278167 29626575 ~ 29631034 (+)
LOC103021358 NA other downstream 1103170 30451578 ~ 30461728 (+)
LOC103032422 atg9b,LOC107717223,LOC102789368,LOC105893796,LOC107599667 other downstream 1628778 30977186 ~ 31001046 (+)
LOC103022800 zgc:92591,LOC103022800,LOC108429172,LOC108260489,LOC107690974,LOC107554735,LOC105895240,LOC105019623 other downstream 1916458 31264866 ~ 31266990 (+)

Expression


Co-expression Network