G94241


Basic Information

Item Value
gene id G94241
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035906.1
NCBI id CM008309.1
chromosome length 35377769
location 29382555 ~ 29383298 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU126796
gcggagactgaggaaagcacatctcccaccccccatcctcaccatgttctacagagggactgtagaaagcatcctgagcacctgcattaccgtctggtttgggaattgcaacacctcagaccgcaagaccctacagcggatagtgcggacagctgagaaaatcatcggagtctctcttccctccatcaccgagatctacaccacacgctgcatccgcaaagccaccagcattgtggacgaccccacccatccctcacacggactcttcgctctgatgccgtccggcagaagatacaggagcatccgagcctccactactagactctgcaacagcttcatccaccaggcagtcagacttctcaacgcacagagacagaactgaactcccaccccacccaccactcacccaacacactcgcacaaaactaaactgtacacccccccccccccctttgcactcacaaagaactgaacttcacccacacacacacacagtcagcacacagaggctgacatgactttatttgctgcactcttaaaaactataaactctacctcagtaactgctgtgattatatatgttctatatgttacagtatgtcacacatctctgcaccttatccccactatacactttattataccgtatcggtactgcactgtcctgtctttaaattgtctcgtcttttgtatttattgtatttattgttatttagtgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU126796 True 719 TUCP 0.49 2 29382555 29383298

Neighbor

gene id symbol gene type direction distance location
LOC103023440 NA coding upstream 8667 29353773 ~ 29373888 (+)
LOC111193370 LOC107395558 coding upstream 156534 29222789 ~ 29226021 (+)
LOC103027516 NA coding upstream 178740 29199757 ~ 29203815 (+)
LOC103022075 LOC108432749 coding upstream 190859 28873542 ~ 29191696 (+)
LOC103025501 lrrc30,lrrc30a,LOC103025501,LOC108432734,LOC107579084,LOC107566920 coding upstream 533142 28846499 ~ 28849413 (+)
LOC103037974 LOC103037974,LOC108410974 coding downstream 25215 29408513 ~ 29416112 (+)
LOC103030628 NA coding downstream 153788 29537086 ~ 29587218 (+)
iglon5 iglon5,zgc:110372,LOC107671460,LOC107707642,LOC107733024,LOC106582734 coding downstream 390962 29774260 ~ 30150516 (+)
LOC103023025 fmnl1 coding downstream 1098991 30482289 ~ 30560811 (+)
LOC103022402 NA coding downstream 1433319 30816617 ~ 30851185 (+)
G94243 NA non-coding upstream 34147 29313219 ~ 29348408 (+)
G94234 NA non-coding upstream 34647 29347353 ~ 29347908 (+)
G94238 NA non-coding upstream 80720 29261437 ~ 29301835 (+)
LOC111193371 NA non-coding upstream 300291 29072604 ~ 29082264 (+)
G94148 NA non-coding upstream 719470 28660365 ~ 28663085 (+)
G94256 NA non-coding downstream 7614 29390912 ~ 29391168 (+)
G94262 NA non-coding downstream 39403 29422701 ~ 29423001 (+)
G94268 lim2,LOC102215845,LOC107379310,LOC100699404 non-coding downstream 72120 29455418 ~ 29461411 (+)
G94285 etfb,LOC103477870 non-coding downstream 135214 29518512 ~ 29530828 (+)
G94288 NA non-coding downstream 141069 29524367 ~ 29524950 (+)
G94233 NA other upstream 16899 29270303 ~ 29365656 (+)
LOC103044382 NA other upstream 35713 29251033 ~ 29346842 (+)
LOC103021747 rheb,LOC107653878,LOC106590380 other upstream 56530 29209278 ~ 29326025 (+)
LOC111193374 NA other upstream 125991 29256178 ~ 29256564 (+)
LOC111193309 l3mbtl4,LOC108432753,LOC107698702,LOC107570871,LOC107728988,LOC107653885,LOC106590345 other upstream 1442622 27919092 ~ 27939933 (+)
hamp hamp other downstream 243277 29626575 ~ 29631034 (+)
LOC103021358 NA other downstream 1068280 30451578 ~ 30461728 (+)
LOC103032422 atg9b,LOC107717223,LOC102789368,LOC105893796,LOC107599667 other downstream 1593888 30977186 ~ 31001046 (+)
LOC103022800 zgc:92591,LOC103022800,LOC108429172,LOC108260489,LOC107690974,LOC107554735,LOC105895240,LOC105019623 other downstream 1881568 31264866 ~ 31266990 (+)
LOC103045891 nradd,LOC108411964,LOC107581538 other downstream 2206649 31589947 ~ 31610978 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
striped catfish (Pangasianodon hypophthalmus) G298603 NA non-coding NC_047613.1 CM018559.1 20358906 ~ 20359754 (+)