G94238


Basic Information

Item Value
gene id G94238
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035906.1
NCBI id CM008309.1
chromosome length 35377769
location 29261437 ~ 29301835 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU126793
ctcaaacacattaagagtcaagaaattcaagtaattaactcttgatgagttcagcacagctgttaactgttaAGCCTGAATTTCAAGTGACTctgcctcataaagctgactgagacaatccagcagagatgtggaaaaatgtctaatctaagaatgtgaaaaataaaacataatctgttttgtttaacacttctttTTTCTacctttactaaataatttgatatgtttttgtttatagtttgg

Function

NR:

description
group XIIA secretory phospholipase A2

GO:

id name namespace
GO:0031667 response to nutrient levels biological_process
GO:0009991 response to extracellular stimulus biological_process
GO:0004982 N-formyl peptide receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU126793 True 243 lncRNA 0.31 2 29261437 29301835

Neighbor

gene id symbol gene type direction distance location
LOC111193370 LOC107395558 coding upstream 35416 29222789 ~ 29226021 (+)
LOC103027516 NA coding upstream 57622 29199757 ~ 29203815 (+)
LOC103022075 LOC108432749 coding upstream 69741 28873542 ~ 29191696 (+)
LOC103025501 lrrc30,lrrc30a,LOC103025501,LOC108432734,LOC107579084,LOC107566920 coding upstream 412024 28846499 ~ 28849413 (+)
LOC103026119 arhgap28,LOC108432752 coding upstream 507198 28697092 ~ 28754239 (+)
LOC103023440 NA coding downstream 51938 29353773 ~ 29373888 (+)
LOC111193298 LOC108410972 coding downstream 75739 29377574 ~ 29386186 (+)
LOC103037974 LOC103037974,LOC108410974 coding downstream 106678 29408513 ~ 29416112 (+)
LOC103030628 NA coding downstream 235251 29537086 ~ 29587218 (+)
iglon5 iglon5,zgc:110372,LOC107671460,LOC107707642,LOC107733024,LOC106582734 coding downstream 472425 29774260 ~ 30150516 (+)
LOC111193371 NA non-coding upstream 179173 29072604 ~ 29082264 (+)
G94148 NA non-coding upstream 598352 28660365 ~ 28663085 (+)
G94147 NA non-coding upstream 599121 28656373 ~ 28662316 (+)
G94145 NA non-coding upstream 605483 28655407 ~ 28655954 (+)
G94132 NA non-coding upstream 631606 28624200 ~ 28629831 (+)
G94243 NA non-coding downstream 11384 29313219 ~ 29348408 (+)
G94234 NA non-coding downstream 45518 29347353 ~ 29347908 (+)
G94256 NA non-coding downstream 89077 29390912 ~ 29391168 (+)
G94262 NA non-coding downstream 120866 29422701 ~ 29423001 (+)
G94268 lim2,LOC102215845,LOC107379310,LOC100699404 non-coding downstream 153583 29455418 ~ 29461411 (+)
LOC111193374 NA other upstream 4873 29256178 ~ 29256564 (+)
LOC111193309 l3mbtl4,LOC108432753,LOC107698702,LOC107570871,LOC107728988,LOC107653885,LOC106590345 other upstream 1321504 27919092 ~ 27939933 (+)
G93753 NA other upstream 2312558 26948463 ~ 26948879 (+)
LOC103034726 LOC108436089 other upstream 2869002 26267493 ~ 26392435 (+)
G93185 LOC105900568,LOC101883708 other upstream 3947730 25311877 ~ 25313707 (+)
G94241 NA other downstream 80720 29382555 ~ 29383298 (+)
hamp hamp other downstream 324740 29626575 ~ 29631034 (+)
LOC103021358 NA other downstream 1149743 30451578 ~ 30461728 (+)
LOC103032422 atg9b,LOC107717223,LOC102789368,LOC105893796,LOC107599667 other downstream 1675351 30977186 ~ 31001046 (+)
LOC103022800 zgc:92591,LOC103022800,LOC108429172,LOC108260489,LOC107690974,LOC107554735,LOC105895240,LOC105019623 other downstream 1963031 31264866 ~ 31266990 (+)

Expression


Co-expression Network