m6pr


Basic Information

Item Value
gene id m6pr
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035906.1
NCBI id CM008309.1
chromosome length 35377769
location 9705663 ~ 9714894 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007249810.3
CGCTGTTTACCGGACGTCACATGAGCTAACGTTACTCGGTTAGTTTCGCTTCCGTCTTTAGGTTTGGAAAACTGGGGGAGAGAAGCGCTTTTATTTGGGGTCTGACTCGCTCCTGTAGTTCTGGATGTAAATGAGCGGGTTTCAGCTTCAGTTTGAGCTTTACTTGTGGATATTCCGGTGTTTTATTAGCTGAGTTAGCGAGACAGCTCGTGGCGCTGTAActtcagctcctcctcctcctctccacaGCGTGTGTCTGACTTCTCCTCCTGCctttacacacactttaataGCTGACTGTGTTTCTGCTGGACTTCATCACACACGCTGCTGCAGGACTACAGGGGAAGGTTTTTATTGGTGGCCATGTTGTTATCTTGGAGAGCAGTCATTCTTCTGGTCTTTTTGGCTTATGGAGGACAAGCAAGTAAGAACACCAAAAAGTGCCGGTTGTCAGTTGAAAACGCTCATGAAAGAAACACCCTTTCTCTCCTAGAGCCCCTTACCAATCAGAGTTTTACTGGAAAGTACGTGAATGGAACGAGTAGCTACACGTACATCTTCAGGGTTTGTGATGATGTAGAAGGGAAACAAGGTGCAGGAGTCATACAGAAGGAGTTAAAGGATGGAAAACCTATAACAACGCTCATTGGGAGCTACAATGACACTCAAGCTATTAAAGGAAGTGACTGGATTATGCTGATCTACAGGGGTGGAGAAAAATATGATACACACTGCTCAAAGGAGGAGAGAAAAGCCATCATCATGCTGTCCTGTAACAAATCTGCGGTTGTGCCAGAGCTGACTGTGGTCCTGGAACAAAGAGAAAGACTCCTTGACTGTTTTTACCTGTTTGAGCTGGACTCCAGTGCACTCTGTCCAGTTACCCCATCCCAATTGAGTGCGGGGTCCATTCTTCTGATTATtGGCTTCTCCTGCTTGGCTGTGTACCTCATTGGTGGATTTCTCTATCAACGACTGGTGGTTGGAGCAAAAGGAGTTGAGCAATTTCCAAACTATGCCTTCTGGTCTGAGATAGGCAACTTATCAGCTGATGGATGTGACTTTGTATGCCGATCCCGTGGCAGGAGAGAGGAGTCGCCTGCTTACAGGGGTGTATCTACTGAACCATTAGAGGAGCCAGAGGAAAGGGATGACCACTTGCTTCCAATGTGACCTTGACAATCTGATCTAGTCAGGTAGAAATAGCCTAGGTTTGACTAAGTTTTGGCAGGGGATGTTAGGTATGTGTCAGACAAAACAAAATGACTTATCTTTAAGCATTCCTTATACTGCTCTATAAATCCCTTACAGACTGATGAATTTCAAATTACAATATCAGCTCAGAAAAGTTGGTTtctcaaaataattttttatacaTTCACAGTGTGAATGTACAGCCTGTGCTTAGATTATTTTCTAAGTAGGgttttgtttattgatttttcTTCATTCAGTTTAGCTCCAAAGAACAtacaaattatacatttactagTGGCCTAAGTGGTTttatttaagtacagtaatgCATTTGATatttataatgaacttattggGTCCTAGTACTGCCCCACTAGGTTTTCTTTGTTGTCTCATTAGGGGGTACCTCagatcatttgtttttttttctgtgttctgctaagggaaagatacattttacaaagattgttttaggttaaggttacTTTAGCATTCTGTTACTGCAACAATTAGAATGCAAATGCTAAACAGAAGCACAGAAATGGTTTGTTGTGCATTCAGCCTATtagaccatatatatatatatagttaagtAGAATGTTCTGTAGTATCAATGACTTgttgttataaatgtttttgtaagAATAACTCATTGTGGAGTGGAAGAGGGAATAAAATTTTGTTTGCTGAAGAATATATAGGTACTTTCGCTATAAAcctaaagaaatatttaatgaTGGATACTGTATGCAGTAAACGgtgaacattaataaaaatgtgataagtataatagaatttttttttccataaatgcATTTCAGCTAGTCTTGCGCTAAACAGCACGGTTAGTGAATGTTTCAGATAGACTGGCCTGTATGCTGATTGCAGTTGGTGAGTGAATATCTATTTAGTTTTGTTGAGTTCAGCTACTGTCACTatttaaaggaaaacatggtaTCTGCTTAATGCACTGCAACTTGCGTCTGCACTGTGTTTATCACAGATGCACAGtgataaacaattttttttgtttatttttattgtttagacTGGATATGAACTAATGGAAAATGCACTTCCAAAGTTGTTTGACAATTCATTTACATTTGCATTTGATACAGACCTCTTTATGGGAGCTTCCTGAAACCCTgatgatcagccataacattaacaccattaattaacattaacattaatactATTATTGAGTAGGTTTCCCTCTGTACTGCAACAACAAATCAGAATCTCATAATTGGTGTTCTGTGGTTGGGTGGGTCCTTCATCAATGATCATCAGTGAGCTTTAGGTGCTCATGACCCTGCCGCCATTTCACTGGTTGTCCACCATTTCACTGCTACCAGAATAAGCCCACAAGCCCTGTCTGTTGATTTTAAGTTTTGACCCAGTTATCCAGCCATCAAAAtgctgctcttgtaataatGGCTATAATCTAAATATTTGCCCCTTTTTGTAGTCAACACATCAACTTTAAGAAGGACTAATCACATGCTGCCTAATATATCCCACCCTTGACAGATGCCACTATAGATGAAGGTAATATATGTTTACCTGTAAGTGGTGTTAATGTTCTGGCTGActagtgtatgtatgtgtatcagTTCCCAACCCTTTTCCTGGAGGACCCCGAGCCCTGCTTTTCCTTCACCTTTTTTCCTATTCCAGTACAACTGATCTAACTAATTTGTAAAATATCAAACCCTTCCTGAGTTAACATGCTGTTGCATTAAATGCTGCAAAATGTTCTCCAGAACCAGGACTGGGAATTGTACATGATTACAAACTACTGGAGCTTAGCTTTGGACCCTACTTCCTTCTGTGCTTACTACTGTGCTTAACCACAGAAATGACTTTTTGACATTTGAAAAAGTTGGCGCTCAAATCAGAGTTAAGACAGATATGAACTTCAGTTCTTTCAGCTCCGACTATATTTGCCCTTTCCTTTTGCTGTTTATTTTGTGTGGAAATAACAAGCGTTGTTTTTTCTTGTGATatgaaaatagaaataaatgcttttgaTTGTTA
>XM_022673509.1
CCGCTGTTTACCGGACGTCACATGAGCTAACGTTACTCGGTTAGTTTCGCTTCCGTCTTTAGGTTTGGAAAACTGGGGGAGAGAAGCGCTTTTATTTGGGGTCTGACTCGCTCCTGTAGTTCTGGATGTAAATGAGCGGGTTTCAGCTTCAGTTTGAGCTTTACTTGTGGATATTCCGGTGTTTTATTAGCTGAGTTAGCGAGACAGCTCGTGGCGCTGTAActtcagctcctcctcctcctctccacaGCGTGTGTCTGACTTCTCCTCCTGCctttacacacactttaataGCTGACTGTGTTTCTGCTGGACTTCATCACACACGCTGCTGCAGGACTACAGGGGAAGTTTTTGTGTCCAGGTTTTTATTGGTGGCCATGTTGTTATCTTGGAGAGCAGTCATTCTTCTGGTCTTTTTGGCTTATGGAGGACAAGCAAGTAAGAACACCAAAAAGTGCCGGTTGTCAGTTGAAAACGCTCATGAAAGAAACACCCTTTCTCTCCTAGAGCCCCTTACCAATCAGAGTTTTACTGGAAAGTACGTGAATGGAACGAGTAGCTACACGTACATCTTCAGGGTTTGTGATGATGTAGAAGGGAAACAAGGTGCAGGAGTCATACAGAAGGAGTTAAAGGATGGAAAACCTATAACAACGCTCATTGGGAGCTACAATGACACTCAAGCTATTAAAGGAAGTGACTGGATTATGCTGATCTACAGGGGTGGAGAAAAATATGATACACACTGCTCAAAGGAGGAGAGAAAAGCCATCATCATGCTGTCCTGTAACAAATCTGCGGTTGTGCCAGAGCTGACTGTGGTCCTGGAACAAAGAGAAAGACTCCTTGACTGTTTTTACCTGTTTGAGCTGGACTCCAGTGCACTCTGTCCAGTTACCCCATCCCAATTGAGTGCGGGGTCCATTCTTCTGATTATtGGCTTCTCCTGCTTGGCTGTGTACCTCATTGGTGGATTTCTCTATCAACGACTGGTGGTTGGAGCAAAAGGAGTTGAGCAATTTCCAAACTATGCCTTCTGGTCTGAGATAGGCAACTTATCAGCTGATGGATGTGACTTTGTATGCCGATCCCGTGGCAGGAGAGAGGAGTCGCCTGCTTACAGGGGTGTATCTACTGAACCATTAGAGGAGCCAGAGGAAAGGGATGACCACTTGCTTCCAATGTGACCTTGACAATCTGATCTAGTCAGGTAGAAATAGCCTAGGTTTGACTAAGTTTTGGCAGGGGATGTTAGGTATGTGTCAGACAAAACAAAATGACTTATCTTTAAGCATTCCTTATACTGCTCTATAAATCCCTTACAGACTGATGAATTTCAAATTACAATATCAGCTCAGAAAAGTTGGTTtctcaaaataattttttatacaTTCACAGTGTGAATGTACAGCCTGTGCTTAGATTATTTTCTAAGTAGGgttttgtttattgatttttcTTCATTCAGTTTAGCTCCAAAGAACAtacaaattatacatttactagTGGCCTAAGTGGTTttatttaagtacagtaatgCATTTGATatttataatgaacttattggGTCCTAGTACTGCCCCACTAGGTTTTCTTTGTTGTCTCATTAGGGGGTACCTCagatcatttgtttttttttctgtgttctgctaagggaaagatacattttacaaagattgttttaggttaaggttacTTTAGCATTCTGTTACTGCAACAATTAGAATGCAAATGCTAAACAGAAGCACAGAAATGGTTTGTTGTGCATTCAGCCTATtagaccatatatatatatatagttaagtAGAATGTTCTGTAGTATCAATGACTTgttgttataaatgtttttgtaagAATAACTCATTGTGGAGTGGAAGAGGGAATAAAATTTTGTTTGCTGAAGAATATATAGGTACTTTCGCTATAAAcctaaagaaatatttaatgaTGGATACTGTATGCAGTAAACGgtgaacattaataaaaatgtgataagtataatagaatttttttttccataaatgcATTTCAGCTAGTCTTGCGCTAAACAGCACGGTTAGTGAATGTTTCAGATAGACTGGCCTGTATGCTGATTGCAGTTGGTGAGTGAATATCTATTTAGTTTTGTTGAGTTCAGCTACTGTCACTatttaaaggaaaacatggtaTCTGCTTAATGCACTGCAACTTGCGTCTGCACTGTGTTTATCACAGATGCACAGtgataaacaattttttttgtttatttttattgtttagacTGGATATGAACTAATGGAAAATGCACTTCCAAAGTTGTTTGACAATTCATTTACATTTGCATTTGATACAGACCTCTTTATGGGAGCTTCCTGAAACCCTgatgatcagccataacattaacaccattaattaacattaacattaatactATTATTGAGTAGGTTTCCCTCTGTACTGCAACAACAAATCAGAATCTCATAATTGGTGTTCTGTGGTTGGGTGGGTCCTTCATCAATGATCATCAGTGAGCTTTAGGTGCTCATGACCCTGCCGCCATTTCACTGGTTGTCCACCATTTCACTGCTACCAGAATAAGCCCACAAGCCCTGTCTGTTGATTTTAAGTTTTGACCCAGTTATCCAGCCATCAAAAtgctgctcttgtaataatGGCTATAATCTAAATATTTGCCCCTTTTTGTAGTCAACACATCAACTTTAAGAAGGACTAATCACATGCTGCCTAATATATCCCACCCTTGACAGATGCCACTATAGATGAAGGTAATATATGTTTACCTGTAAGTGGTGTTAATGTTCTGGCTGActagtgtatgtatgtgtatcagTTCCCAACCCTTTTCCTGGAGGACCCCGAGCCCTGCTTTTCCTTCACCTTTTTTCCTATTCCAGTACAACTGATCTAACTAATTTGTAAAATATCAAACCCTTCCTGAGTTAACATGCTGTTGCATTAAATGCTGCAAAATGTTCTCCAGAACCAGGACTGGGAATTGTACATGATTACAAACTACTGGAGCTTAGCTTTGGACCCTACTTCCTTCTGTGCTTACTACTGTGCTTAACCACAGAAATGACTTTTTGACATTTGAAAAAGTTGGCGCTCAAATCAGAGTTAAGACAGATATGAACTTCAGTTCTTTCAGCTCCGACTATATTTGCCCTTTCCTTTTGCTGTTTATTTTGTGTGGAAATAACAAGCGTTGTTTTTTCTTGTGATatgaaaatagaaataaatgcttttgaTTGTTA

Function

NR:

description
cation-dependent mannose-6-phosphate receptor-like

GO: NA

KEGG:

id description
K10089 M6PR; cation-dependent mannose-6-phosphate receptor

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007249810.3 False 3243 mRNA 0.39 7 9705664 9714894
XM_022673509.1 True 3257 mRNA 0.39 7 9705663 9714894

Neighbor

gene id symbol gene type direction distance location
LOC103033304 NA coding upstream 37932 9645619 ~ 9667731 (+)
LOC103041564 LOC103041564,LOC108428935,LOC107684163,LOC107748751,LOC107596677 coding upstream 61122 9642187 ~ 9644541 (+)
LOC103033624 NA coding upstream 71234 9628100 ~ 9634429 (+)
LOC103043727 LOC108429009 coding upstream 216004 9479311 ~ 9489659 (+)
LOC103043416 LOC108429005 coding upstream 227216 9462666 ~ 9478447 (+)
casp2 casp2 coding downstream 1587 9716481 ~ 9725000 (+)
LOC103041264 clcn1b,LOC107744675,LOC108268386,LOC107569998,LOC107699941,LOC107596673,LOC107748802,LOC108429023 coding downstream 20179 9735073 ~ 9784636 (+)
LOC103029170 zyx,LOC108428910,LOC102794270 coding downstream 154133 9869027 ~ 9900615 (+)
LOC103040945 NA coding downstream 187657 9902551 ~ 9914439 (+)
emg1 emg1,LOC107699927,LOC107744679 coding downstream 200196 9915090 ~ 9918087 (+)
G89455 NA non-coding upstream 92683 9612722 ~ 9612980 (+)
G89454 NA non-coding upstream 97176 9603646 ~ 9608487 (+)
G89436 NA non-coding upstream 171380 9533642 ~ 9534283 (+)
G89429 LOC108429011,LOC108268485,LOC101064094,LOC107741984,LOC107684166 non-coding upstream 190976 9513107 ~ 9514687 (+)
G89420 NA non-coding upstream 214534 9427038 ~ 9491129 (+)
G89492 LOC108429024 non-coding downstream 77788 9792682 ~ 9793009 (+)
G89619 NA non-coding downstream 297256 10012150 ~ 10012423 (+)
G89624 rpl18 non-coding downstream 374990 10089884 ~ 10453879 (+)
G89636 NA non-coding downstream 391231 10106125 ~ 10180419 (+)
LOC103022254 NA non-coding downstream 513049 10227943 ~ 10289605 (+)
G89453 NA other upstream 95409 9602771 ~ 9610254 (+)
sumo1 NA other upstream 1456229 8242319 ~ 8249434 (+)
LOC111193322 NA other upstream 1625635 8077097 ~ 8080028 (+)
G88849 NA other upstream 2125703 7578610 ~ 7579960 (+)
trnap-agg_3 NA other upstream 2462686 7242906 ~ 7242977 (+)
iffo1 iffo1 other downstream 260303 9975197 ~ 10000914 (+)
G89805 NA other downstream 970763 10685657 ~ 10686056 (+)
G89806 NA other downstream 973372 10688266 ~ 10688820 (+)
LOC103044517 onecutl,LOC108441924,LOC107732477,LOC108268128,LOC107741751,LOC106580869,LOC107663311,LOC107689849 other downstream 1065208 10780102 ~ 10791128 (+)
LOC111193328 NA other downstream 1188789 10903683 ~ 10907172 (+)

Expression


Co-expression Network