Gene
RNA
| Item | Value |
|---|---|
| gene id | utp11 |
| gene name | utp11 |
| gene type | coding |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035906.1 |
| NCBI id | CM008309.1 |
| chromosome length | 35377769 |
| location | 17860580 ~ 17865075 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| symbol | description |
|---|---|
| utp11 | Predicted to act upstream of or within rRNA processing. Predicted to be located in nucleus and viral nucleocapsid. Predicted to be part of small-subunit processome. Predicted to be active in nucleolus. Orthologous to human UTP11 (UTP11 small subunit processome component). |
| description |
|---|
| PREDICTED: probable U3 small nucleolar RNA-associated protein 11 |
| id | description |
|---|---|
| K14769 | UTP11; U3 small nucleolar RNA-associated protein 11 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_022673708.1 | True | 1249 | mRNA | 0.42 | 8 | 17860580 | 17865075 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| rspo1 | rspo1 | coding | upstream | 107033 | 17707735 ~ 17753547 (+) |
| dnali1 | NA | coding | upstream | 222970 | 17634185 ~ 17637610 (+) |
| LOC103041872 | phactr4 | coding | upstream | 422381 | 17383964 ~ 17438199 (+) |
| LOC111193338 | NA | coding | upstream | 494110 | 17362133 ~ 17366470 (+) |
| hivep3 | hivep3 | coding | upstream | 509636 | 17272114 ~ 17350944 (+) |
| LOC111193302 | NA | coding | downstream | 482949 | 18348024 ~ 18350624 (+) |
| LOC111193341 | NA | coding | downstream | 486888 | 18351963 ~ 18352643 (+) |
| LOC103024770 | NA | coding | downstream | 489088 | 18354163 ~ 18354889 (+) |
| LOC111193340 | NA | coding | downstream | 493848 | 18358923 ~ 18361117 (+) |
| rrp15 | rrp15 | coding | downstream | 503696 | 18368771 ~ 18374278 (+) |
| G91633 | NA | non-coding | upstream | 182375 | 17677865 ~ 17678205 (+) |
| G91628 | NA | non-coding | upstream | 201469 | 17657096 ~ 17659111 (+) |
| G91621 | gpn2,LOC107700685,LOC107704877 | non-coding | upstream | 231911 | 17627288 ~ 17628669 (+) |
| G91599 | arid1a,LOC107704838 | non-coding | upstream | 274383 | 17585501 ~ 17586197 (+) |
| G91597 | NA | non-coding | upstream | 284796 | 17574544 ~ 17575784 (+) |
| LOC107197683 | NA | non-coding | downstream | 48036 | 17913111 ~ 17925434 (+) |
| G91690 | NA | non-coding | downstream | 66400 | 17931475 ~ 17931750 (+) |
| G91708 | NA | non-coding | downstream | 195103 | 18060178 ~ 18090208 (+) |
| G91721 | NA | non-coding | downstream | 411081 | 18276156 ~ 18276397 (+) |
| G91723 | NA | non-coding | downstream | 460385 | 18325460 ~ 18325723 (+) |
| rcc1 | NA | other | upstream | 412647 | 17358839 ~ 17447933 (+) |
| trim71 | trim71,LOC107751884,LOC107657583,LOC107601676,LOC107723073,LOC107551222 | other | upstream | 1441200 | 16395214 ~ 16419380 (+) |
| LOC103025288 | LOC107578870,LOC108428970,LOC106578494,LOC108273189 | other | upstream | 2577525 | 15276142 ~ 15283055 (+) |
| alg14 | alg14,LOC107739035 | other | upstream | 2644072 | 15160215 ~ 15216508 (+) |
| LOC103045856 | NA | other | upstream | 3087213 | 14662657 ~ 14773367 (+) |
| G91678 | NA | other | downstream | 46826 | 17911901 ~ 17912443 (+) |
| G91728 | NA | other | downstream | 482952 | 18348027 ~ 18361095 (+) |
| G91748 | NA | other | downstream | 535413 | 18400488 ~ 18421263 (+) |
| G91760 | NA | other | downstream | 626605 | 18491680 ~ 18492072 (+) |
| lyplal1 | lyplal1 | other | downstream | 629284 | 18494359 ~ 18507035 (+) |
