G91708


Basic Information

Item Value
gene id G91708
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035906.1
NCBI id CM008309.1
chromosome length 35377769
location 18060178 ~ 18090208 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU123338
aagacgcagagcgttcagacctcaaataatgcaaagaaaacaagttcatactcataaagttttaagagttcataaatcaatatttggtggaataaccctgtttttaatcacagttttcatgcatcttggcatgttctcctccaccagtcttacacactgcttttagataactttatgccactcctggtgcaaaaaaaatcaagcagttcagcttggtttgatggcttgtgatcatccatct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU123338 True 241 lncRNA 0.37 2 18060178 18090208

Neighbor

gene id symbol gene type direction distance location
utp11 utp11 coding upstream 195103 17860580 ~ 17865075 (+)
rspo1 rspo1 coding upstream 306631 17707735 ~ 17753547 (+)
dnali1 NA coding upstream 422568 17634185 ~ 17637610 (+)
LOC103041872 phactr4 coding upstream 621979 17383964 ~ 17438199 (+)
LOC111193338 NA coding upstream 693708 17362133 ~ 17366470 (+)
LOC111193302 NA coding downstream 257816 18348024 ~ 18350624 (+)
LOC111193341 NA coding downstream 261755 18351963 ~ 18352643 (+)
LOC103024770 NA coding downstream 263955 18354163 ~ 18354889 (+)
LOC111193340 NA coding downstream 268715 18358923 ~ 18361117 (+)
rrp15 rrp15 coding downstream 278563 18368771 ~ 18374278 (+)
G91690 NA non-coding upstream 128428 17931475 ~ 17931750 (+)
LOC107197683 NA non-coding upstream 134744 17913111 ~ 17925434 (+)
G91633 NA non-coding upstream 381973 17677865 ~ 17678205 (+)
G91628 NA non-coding upstream 401067 17657096 ~ 17659111 (+)
G91621 gpn2,LOC107700685,LOC107704877 non-coding upstream 431509 17627288 ~ 17628669 (+)
G91721 NA non-coding downstream 185948 18276156 ~ 18276397 (+)
G91723 NA non-coding downstream 235252 18325460 ~ 18325723 (+)
G91729 NA non-coding downstream 261726 18351934 ~ 18354548 (+)
G91836 NA non-coding downstream 637401 18727609 ~ 18727825 (+)
G91837 cenpw,LOC107668290,LOC107600551,LOC107666774 non-coding downstream 638499 18728707 ~ 18739376 (+)
G91678 NA other upstream 147735 17911901 ~ 17912443 (+)
rcc1 NA other upstream 612245 17358839 ~ 17447933 (+)
trim71 trim71,LOC107751884,LOC107657583,LOC107601676,LOC107723073,LOC107551222 other upstream 1640798 16395214 ~ 16419380 (+)
LOC103025288 LOC107578870,LOC108428970,LOC106578494,LOC108273189 other upstream 2777123 15276142 ~ 15283055 (+)
alg14 alg14,LOC107739035 other upstream 2843670 15160215 ~ 15216508 (+)
G91728 NA other downstream 257819 18348027 ~ 18361095 (+)
G91748 NA other downstream 310280 18400488 ~ 18421263 (+)
G91760 NA other downstream 401472 18491680 ~ 18492072 (+)
lyplal1 lyplal1 other downstream 404151 18494359 ~ 18507035 (+)
LOC103028566 fez2 other downstream 513830 18604038 ~ 18613717 (+)

Expression


Co-expression Network