G45175


Basic Information

Item Value
gene id G45175
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 7598193 ~ 7598590 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU51336
TAACAATAACGATATAGAGAAACAATATCGTTGGGACCACTTTCAGAACGATTTTTTTCAGGCTGTTGAATGATAAAACACTGACAGCCAATCAGAATCCATTCTAATTCAAGGGCTTGCGCATTAAATGGTAGACGAAATCGCAGAGAAGTTAACCTCCAAGGTCCAGAAAAAGCCACCACTTTTTGACAAGTCAACCCGCCTTTTCAAGGATACTTTAAAGAAAATGGATACATGGAAAACAATCGCCCCTGATTAAATGTCATAGCCCCTGAATAAATGGTGAGAACAGTGTAACATAAAATTATCTCAGGTATCCAGCGCTAGTTTCGACAACAATGTCTTGCTTCTTTTGAAGTTGCAGTGAAAAAGGCTAGGCATTGTTTTTATTCCACTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU51336 True 398 lncRNA 0.38 1 7598193 7598590

Neighbor

gene id symbol gene type direction distance location
CI01000006_07577082_07582303 DUSP4 coding upstream 15880 7576398 ~ 7582313 (+)
CI01000006_07492187_07498391 NA coding upstream 99519 7492187 ~ 7498674 (+)
CI01000006_07486574_07490054 SLC26A1 coding upstream 107617 7485978 ~ 7490576 (+)
CI01000006_07477200_07478617 RBP4L coding upstream 119407 7476928 ~ 7478786 (+)
CI01000006_07458458_07460310 ATP5I, ATP5IA coding upstream 137883 7458113 ~ 7460310 (+)
CI01000006_07692311_07693192 PPP1R3B coding downstream 93650 7692240 ~ 7694117 (+)
CI01000006_07694812_07698078 ERI1 coding downstream 96222 7694812 ~ 7698434 (+)
CI01000006_07699736_07726659 MFHAS1 coding downstream 101146 7699736 ~ 7726997 (+)
CI01000006_07757777_07795187 NNT.L, NNT coding downstream 158936 7757526 ~ 7795258 (+)
CI01000006_07939608_07940846 RXFP3 coding downstream 340728 7939318 ~ 7941415 (+)
G45174 NA non-coding upstream 436 7597380 ~ 7597757 (+)
G45154 NA non-coding upstream 43859 7554097 ~ 7554334 (+)
G45151 NA non-coding upstream 48183 7549799 ~ 7550010 (+)
G45148 NA non-coding upstream 54124 7543813 ~ 7544069 (+)
G45146 NA non-coding upstream 56335 7541654 ~ 7541858 (+)
G45132 NA non-coding downstream 246 7598836 ~ 7599365 (+)
G45179 NA non-coding downstream 5095 7603685 ~ 7604821 (+)
G45178 NA non-coding downstream 9014 7607604 ~ 7683671 (+)
G45219 NA non-coding downstream 66303 7664893 ~ 7665756 (+)
G45233 NA non-coding downstream 87368 7685958 ~ 7686176 (+)
G44872 NA other upstream 210309 7356352 ~ 7387884 (+)
CI01000006_07167131_07168925 NA other upstream 427659 7166778 ~ 7168925 (+)
CI01000006_06122278_06122736 NA other upstream 1469518 6122035 ~ 6122751 (+)
CI01000006_06104927_06109730 NA other upstream 1488605 6104927 ~ 6109820 (+)
G43896 NA other upstream 1826418 5770089 ~ 5771775 (+)
G45265 NA other downstream 285277 7883867 ~ 7920355 (+)
G45336 NA other downstream 420752 8019342 ~ 8021951 (+)
CI01000006_08198328_08199463 NA other downstream 560926 8197881 ~ 8200145 (+)
G45355 NA other downstream 610965 8209555 ~ 8212388 (+)

Expression


Co-expression Network