G45179


Basic Information

Item Value
gene id G45179
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 7603685 ~ 7604821 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU51345
GGCAGACAAAGCATCAGGATTTTCAAGCATGAGATCCAGTAACGTGAGCGAGAACGAATAGAGCCATCTTACGATTCTTCCCGTAGGCAAACGGCAGACGAGTAACGTGTTCTCTAGGCAAGTGTCACAACCATACGTTACACAGCCCATTGCACCGGTGGAAAAAGCGAATGTGTGATAGCTAGAGTAAAACCATGTTTCTGTATCTCTGCCTGATGGTTAGGGCCGTCACCCACCTGCTGCTGGCCTGGCCTAGCAAGATAAGTGGACTGACCAGAGCGCTCACTCCATCTGTTCAGTGACATTTGCTGATCTGTGCTGTTCTGCACGCAGTATGAGTCCTGCTATGAGTCACTGGCATGGCTGTAGTGTTGTACAAATGATGATCCTGGAGAAGTGCTCTCCTACTCTGAACTCAGATCTGTTGTGGGTCAATCTTTTTAGTCTGTACATGTGTAGCAGAATTGTTTTCTAGCACGATCATTCCCATTATTATTATTTTGTTGGGTATAAACTGAATGATTATTATATATTTGACAAGTGAATTGCCTACACACACACTTAAAGGATTAGTTCACTTCAGAATTAAAATTTCCTGATAATTTACTCACCCCATGTTTTTGAGGAAAACATTTGAGGATTTTTCTCCATATAGTGGATTTCAATGGGGATCAACGGGTTAAAGGCCCAAATTGCCGTTTCAATGCAGCTTCAAAGGGCTCTACACAATCCTAGCAGAGAAATAAGGGTCTTATCTAGCGAAACGATCGGTCATTTTCTTAAAAAAATTAAATAAATATATACTTTTTAACCACAAATGCTCGTCTTGCACTAGCTCTGCGATGCGCCACGCATTACGTAATCATGTTGGAAAGGTGATGCGTGACGTAGGCGGAAGTACCGCGGTAAGGTAAAGAACTCCATCTCATTTTGTCCTCCAACTTCAAAATCATCCATCATTGTTTTACCTTTTTTTGTAAAGGGAGTTTAACTTAGTCTTTGCACGTTCGCTTTGTAAAAACTTGCTCGGTACTTCCACCTAGGTCATGAGTGACCTTTCCAACGTGATTACGCAATGTGTGAAGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU51345 True 1087 lncRNA 0.47 2 7603685 7604821

Neighbor

gene id symbol gene type direction distance location
CI01000006_07577082_07582303 DUSP4 coding upstream 21372 7576398 ~ 7582313 (+)
CI01000006_07492187_07498391 NA coding upstream 105011 7492187 ~ 7498674 (+)
CI01000006_07486574_07490054 SLC26A1 coding upstream 113109 7485978 ~ 7490576 (+)
CI01000006_07477200_07478617 RBP4L coding upstream 124899 7476928 ~ 7478786 (+)
CI01000006_07458458_07460310 ATP5I, ATP5IA coding upstream 143375 7458113 ~ 7460310 (+)
CI01000006_07692311_07693192 PPP1R3B coding downstream 87419 7692240 ~ 7694117 (+)
CI01000006_07694812_07698078 ERI1 coding downstream 89991 7694812 ~ 7698434 (+)
CI01000006_07699736_07726659 MFHAS1 coding downstream 94915 7699736 ~ 7726997 (+)
CI01000006_07757777_07795187 NNT.L, NNT coding downstream 152705 7757526 ~ 7795258 (+)
CI01000006_07939608_07940846 RXFP3 coding downstream 334497 7939318 ~ 7941415 (+)
G45132 NA non-coding upstream 4320 7598836 ~ 7599365 (+)
G45175 NA non-coding upstream 5095 7598193 ~ 7598590 (+)
G45174 NA non-coding upstream 5928 7597380 ~ 7597757 (+)
G45154 NA non-coding upstream 49351 7554097 ~ 7554334 (+)
G45151 NA non-coding upstream 53675 7549799 ~ 7550010 (+)
G45178 NA non-coding downstream 2783 7607604 ~ 7683671 (+)
G45219 NA non-coding downstream 60072 7664893 ~ 7665756 (+)
G45233 NA non-coding downstream 81137 7685958 ~ 7686176 (+)
G45201 NA non-coding downstream 129988 7734809 ~ 7748959 (+)
G45244 NA non-coding downstream 214292 7819113 ~ 7819734 (+)
G44872 NA other upstream 215801 7356352 ~ 7387884 (+)
CI01000006_07167131_07168925 NA other upstream 433151 7166778 ~ 7168925 (+)
CI01000006_06122278_06122736 NA other upstream 1475010 6122035 ~ 6122751 (+)
CI01000006_06104927_06109730 NA other upstream 1494097 6104927 ~ 6109820 (+)
G43896 NA other upstream 1831910 5770089 ~ 5771775 (+)
G45265 NA other downstream 279046 7883867 ~ 7920355 (+)
G45336 NA other downstream 414521 8019342 ~ 8021951 (+)
CI01000006_08198328_08199463 NA other downstream 554695 8197881 ~ 8200145 (+)
G45355 NA other downstream 604734 8209555 ~ 8212388 (+)

Expression


Co-expression Network