G46741


Basic Information

Item Value
gene id G46741
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 10210903 ~ 10211117 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU53149
TGCAAATATGGGTAGAGTATGTGCAACTGCTTTTTATCACTTAAAGAAGCACCACAATTTTAAGATTTTGTCTTCTGTTAGTTACATAGCAAATACTGAACATACATTTAGAAGTTTATTTTAAAATGCAAATTATTGAAAATAATAATTTAAAAAAAAATCTCTGTAAACACTTGCAATTTTTGCAAGACTATAAGTTCTATACACACTTGCGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU53149 True 215 lncRNA 0.49 1 10210903 10211117

Neighbor

gene id symbol gene type direction distance location
CI01000006_10177090_10192651 NA coding upstream 17384 10177090 ~ 10193519 (+)
CI01000006_09998680_10008491 LHX5 coding upstream 201855 9998680 ~ 10009048 (+)
CI01000006_09918611_09921465 MZT2B coding upstream 289110 9918611 ~ 9921793 (+)
CI01000006_09910027_09913958 NA coding upstream 296799 9909370 ~ 9914104 (+)
CI01000006_09891107_09897750 NA coding upstream 313140 9891107 ~ 9897763 (+)
CI01000006_10363884_10364804 NA coding downstream 152679 10363796 ~ 10365571 (+)
CI01000006_10518326_10566504 SFSWAP coding downstream 307209 10518326 ~ 10566504 (+)
CI01000006_10574971_10578629 NA coding downstream 363491 10574608 ~ 10578964 (+)
CI01000006_10593624_10605226 NA coding downstream 382127 10593244 ~ 10606273 (+)
CI01000006_10707037_10743311 MMP17, MMP17A coding downstream 495827 10706944 ~ 10743594 (+)
G46652 NA non-coding upstream 53601 10156579 ~ 10159251 (+)
G46717 NA non-coding upstream 85892 10121321 ~ 10125011 (+)
G46706 NA non-coding upstream 122069 10088629 ~ 10088834 (+)
G46705 NA non-coding upstream 122879 10087538 ~ 10088024 (+)
G46704 NA non-coding upstream 123927 10086377 ~ 10086976 (+)
G46750 NA non-coding downstream 16796 10227913 ~ 10228126 (+)
G46754 NA non-coding downstream 19166 10230283 ~ 10230512 (+)
G47041 NA non-coding downstream 26210 10237327 ~ 10237529 (+)
G47054 NA non-coding downstream 53506 10264623 ~ 10268634 (+)
G47062 NA non-coding downstream 66007 10277124 ~ 10277368 (+)
G45416 NA other upstream 1376206 8818814 ~ 8834697 (+)
G45355 NA other upstream 1998515 8209555 ~ 8212388 (+)
CI01000006_08198328_08199463 NA other upstream 2010758 8197881 ~ 8200145 (+)
G45336 NA other upstream 2188952 8019342 ~ 8021951 (+)
G47145 NA other downstream 274241 10485358 ~ 10511806 (+)
G47159 NA other downstream 1205112 11416229 ~ 11521703 (+)
G47318 NA other downstream 1413150 11624267 ~ 11638252 (+)
G48094 NA other downstream 2066503 12277620 ~ 12279541 (+)
G48081 NA other downstream 2165889 12377006 ~ 12384827 (+)

Expression


Co-expression Network