rc3h1 (rc3h1,LOC108429496)


Basic Information

Item Value
gene id rc3h1
gene name rc3h1,LOC108429496
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035901.1
NCBI id CM008304.1
chromosome length 40584741
location 14026773 ~ 14052048 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007240113.3
gcgcatgcgcgccGGCTGTAGTTTGTAGCCGCTCAGAGCAAACACACCCCTGCCGAGATGGCGACCGAGATTATGCTGCTGTATTTGGCCATAAATCGCTAAAGAACTGTTATGTATTCAGCACCGTGTGCTAAACGTCCGCAATGCCTGAAGATCTTTGAAAAGCTGGACGTTCAGAAGAGTGTTTCCGATTCCCGTGGAATCTATAGGACGTTTGccctttttgtttttaacaaaacGTACCCAAGCCTGACCGTAAAGGAAGGCGCAGAGCTGAAAGGATACCTGGGCCGCCAGCGCATCGGAGATCCCCTCTCGTTACGATGCCCGTTCAAGCGCCACAATGGACGGAGTTTCTGTTGTGTCCCATCTGCACGCAAACGTTCGAGGAGAATGCCCGCAAGCCTATCAGCTTGGGCTGCGGACACACCGTGTGCAAGATGTGCCTGAACAAGCTGCACCGCAAGGCTTGCCCCTTCGACCAGACCACCATCAGCACCGACATCGAGCTGCTGCCTGTCAACACCGCCCTGCTGCAGCTGGTCTGTGGTCAGgtGCCCAAGTCTCAGCCCGTCACCTTGGTGAGAGGAGCAGAAGACACCAAGCATTATGACGAAGCTCGCACCTGTGTGGAGGAGCTGGCTCTCTACCTCAAACCCCTCAGCAACACCAGAGGTGTGGGGTTGGGCAGTGCAACCCAGAGTCTTCTCAGCAGGCCCATGCAAAGGAAACTGGTGACTCTAGTACACTGCcagctggtggaggaggagggtcGTATCCGGGCCATGCGGGCTGCTCGCTCTCTAGGGGAACGCACAGTGACCGAGCTCATCCTGCAGCACCAAAACCCACAGCAGCTCTCCTCCAACCTGTGGGCTGCAGTCCGAGCTCGGGGCTGCCAGTTCCTCGGCCCTGCTATGCAGGAAGAGGCCCTGAAGCTCGTCTTGTTGGCGTTAGAGGATGGATCAGCCCTCTCCCGCAAGGTTCTGGTTTTGTTTGTGGTCCAGAGGCTGGAGCCCCGCTTTCCTCAGGCTTCTAAAACCAGTATAGGACATGTGGTGCAGCTTCTTTACAGAGCCTCCTGTTTTAAGgTGACTAAGCGAGACGAGGACTCCTCTTTAATGCAGCTGAAGGAGGAGTTCCGCACGTACGAGGCTCTGAGGAGAGAGCACGACTCTCAGATCGTCCAGATTGCCATGGAGGGAGGCTTACGTATAGCTCCTGACCAGTGGTCCTCCCTGCTCTATGGAGACCAGTCCCATAAGTCCCACATGCAGTCCATCATAGATAAGCTGCAGACCCCAGCGTCCTTTGCCCAGAGTGTGCAGGAGCTCACCattgccctgcagagaacaggAGACCCAGCCAACCTCAACCGCCTCAGACCGCATTTAGAGCTGCTGGCTGACATCGACCCCAGCCCAGATGCCCCGGCACCAACATGGGAGCAACTTGACAAAGGACTCGTAGCTGTAAAGACGGTTGTGCACGGCTTAGTGGACTTCATCCAGAACCACAGCAAGAAAGGAGGAGATCCACAGCAGGCCCCTCAGCACAGTAAATACAAGACCTACATGTGTCGAGATATGAAGCAGAAAGGAGGTTGTCCCAGAGGAGCCAGCTGCACTTTTGCCCATTCCCAGGAGGAGCTGGAAAAGTATCGCAAGATGAACAAGCGGTTGCCCACCAGGAAGACCTTAAGCCAGTCCCTGACGCAGCTTAATGACATGGACATGGTTTGCCCCTCAAACCTTCTTCCTGATGAGGGTTTGGGTGTGGAGGGTCTGGTCCATAAACCTGGACTTGTCACTAATGGCATCATACATGTGGGTCCTGGATCCGGGCTGCTGATCTCACGAGGTGCAGATCCTTCATATGAACCAGTACGCAAGCTGGGGAAGCCGGAGAGCGGAGGCAGCCTCAGTGCTCCGGATTCACCTCCAGACTCATTGGATCCCATGCCTAAGGTGATGTTGCCTGCACCTCCTCATCCTAGAGGGTCCAGGGAGAGTCTAGCTAGCCATAAACACCTGTCTACTGCCTCCAGAATTGCCCAGATACCTCAGTACCCTCCACATCAGCTCGAGGGCTATTACTCAGACTCCAGACCACCACATTCTGCCTCCCAGTACGAACCTTCTCAGTATCCTGCAGgGAACTCCTACAATTATTCACACATGCATCGCTACGCCCGTAACCCTGGTCCCCCTGCTGACCCAGCCTACCCAGACTCCTATCCACTTTCCTATGCTTCAGAACGCCAGTATGCAACTCCACCCTCTGACCCTCGGTATAGCTACCCACCGCATCACGACGGCGGCCGCCGCCACCCAGCGTACGGAGGCCACCTCCCACCCCAGTCCTACACACGGGATGAGCTGGGGCACAGGAGTCCAGTGCCTATGGACgcacccccaccaccacagCCCCAAACAGCAGGGGCCTCCGCCTACCTTCCAGAGTCATCACGAGACCGATACAACGCTCAGATCTACAACCACCACGGCCAGAGCAGATCTCACAGCAGGgctgcCTACCCTAGACCACAGCCCTCCTTGGATGACCTGCACCGTCGAAGAAAGGAAATCATGGCTCAGCTAGAAGAGGTTAAAGTTGTCTCCCCTCCTCCTTTTGGCTCTTCTTCAAACCTGGCCCCACCTTATGAACCAAGCTACAGCCAAGAAGCCAGAGGACAAAGCCATTACATGGAAGAGAACTCCACTGCATTCGAGAGCTTCAGGGAGCCAGACTACGCTGCTCAGTACTCCCCGTGGTCATGTGGCACCTTTGTTCCATACATCGGCAAGGATATGAAATCCAAAGAGGGCATGGCTGCAGGCTACATGGAAATGCAGAATGTAGAAAAGAGCCTGAGAGATCCTGCATTGGAGCTGCAGCGCAGGGCACCTGAGGTCAAAGACGACGACCCCATCATTCCGTTCGGCTCACTGCCCACTGTTTCGCGCTTCGGAGCCATCTCCCGCACGTCCAAATCTGGCTACCAGCCTGCTGGCCTGATGCCAGGCCACCCAGCCAAACACACTGCCAGTGCGGTTGATTATAACTATGGAAATCATGGAGGTTGGAGTGAAGCTTCATACCCCCAACATCAAACCATGCCATCTCAGGGATACTTCAGTGAACGCCTGCCCCCTGCTGGCCCGGATCGGGAACAGCTGAGGATGGAACTACAGCAGGTCAACCAACAGATCACTCAGCAGACTCGGTCTATAGAGAGCTCCAGCAGTGTGGTGGCTATGCAGAGAGAGCCTGTCTCTATGGCCGGCCAGTCCGCTCCAGTGGAGTGGTCCACAGCTGGCGTGTCCAGTGAGCAGCTGAGCCTGGAGCTGCATCAGGTGGAGAGAGAGATCGGCATGAGGACGAGGGAGATGGCCTTGGAGGGCCATGGGATGAAGTATAAATGTGAAAATGGACAGAGTGATCATGGCATGCAGCGAGAGGAGCACCAGCTAGCCCTCAGCGAGGGCTCAAATGGCTCGAGTTCTGTGGTGCAGGACTGCGGTTtgggcagcagcagcatgtcCTCTCTGACCAGCAAGACGTCCTCCCTGAGCCTGTCATCCGATCTGGTGGCAAGCAGCCCGGACCTGTCGAAGAATGGGGTGGTTCACACATGTTCCTAGCCCATTCTCTTTGTCTTATGCTACCTGCTGCCCAAGACTAGTGTggcccttctctctttctctctctctctctctctctctgtctttttctctctttcttcaaaAAGACTTTGGTCTTTAGCTGGTCTTACCTATTCATATTCACTTCAAACATCCCCTACAAGGCCACATTACAGCATCCCTCTGTCCAGCATGCTCCTGCTTTTATTGGATGACTTCTATCGTTCTTGCCGCCGCAGTATTGGGATGTTGAATATCCCAGATTTCACATTTTGTTGAGGATAAGGGCTACGTTGGTACAATCTGGATTTAAAACAACCACTAATGGACAACCAGGCAGATGTGGGTGGgattcatttaaatttaatgaCAAACAAACTGGCACAGTCAGACTTacgggattttttttttccataagcAGTATCTGCcatttattcagttatttttaattttttgttctaTGAATGAatttgctttccttttttttctatgaCAAAGCGTATCTCTCATTGCCTTGTAAGTCTCAGGGCATCTGAGAAACATTTTAGCAA
>XM_007240114.2
TTTGGGATGTGTGCTGTTATATAATGCCTGTTGGATTATGACCGTTTGGCACGCGACAGCAAGATGTTAGATTGTACTGAAGGAGCGTCAGTGTTTCTATGAAGGTTATGTATTCAGCACCGTGTGCTAAACGTCCGCAATGCCTGAAGATCTTTGAAAAGCTGGACGTTCAGAAGAGTGTTTCCGATTCCCGTGGAATCTATAGGACGTTTGccctttttgtttttaacaaaacGTACCCAAGCCTGACCGTAAAGGAAGGCGCAGAGCTGAAAGGATACCTGGGCCGCCAGCGCATCGGAGATCCCCTCTCGTTACGATGCCCGTTCAAGCGCCACAATGGACGGAGTTTCTGTTGTGTCCCATCTGCACGCAAACGTTCGAGGAGAATGCCCGCAAGCCTATCAGCTTGGGCTGCGGACACACCGTGTGCAAGATGTGCCTGAACAAGCTGCACCGCAAGGCTTGCCCCTTCGACCAGACCACCATCAGCACCGACATCGAGCTGCTGCCTGTCAACACCGCCCTGCTGCAGCTGGTCTGTGGTCAGgtGCCCAAGTCTCAGCCCGTCACCTTGGTGAGAGGAGCAGAAGACACCAAGCATTATGACGAAGCTCGCACCTGTGTGGAGGAGCTGGCTCTCTACCTCAAACCCCTCAGCAACACCAGAGGTGTGGGGTTGGGCAGTGCAACCCAGAGTCTTCTCAGCAGGCCCATGCAAAGGAAACTGGTGACTCTAGTACACTGCcagctggtggaggaggagggtcGTATCCGGGCCATGCGGGCTGCTCGCTCTCTAGGGGAACGCACAGTGACCGAGCTCATCCTGCAGCACCAAAACCCACAGCAGCTCTCCTCCAACCTGTGGGCTGCAGTCCGAGCTCGGGGCTGCCAGTTCCTCGGCCCTGCTATGCAGGAAGAGGCCCTGAAGCTCGTCTTGTTGGCGTTAGAGGATGGATCAGCCCTCTCCCGCAAGGTTCTGGTTTTGTTTGTGGTCCAGAGGCTGGAGCCCCGCTTTCCTCAGGCTTCTAAAACCAGTATAGGACATGTGGTGCAGCTTCTTTACAGAGCCTCCTGTTTTAAGgTGACTAAGCGAGACGAGGACTCCTCTTTAATGCAGCTGAAGGAGGAGTTCCGCACGTACGAGGCTCTGAGGAGAGAGCACGACTCTCAGATCGTCCAGATTGCCATGGAGGGAGGCTTACGTATAGCTCCTGACCAGTGGTCCTCCCTGCTCTATGGAGACCAGTCCCATAAGTCCCACATGCAGTCCATCATAGATAAGCTGCAGACCCCAGCGTCCTTTGCCCAGAGTGTGCAGGAGCTCACCattgccctgcagagaacaggAGACCCAGCCAACCTCAACCGCCTCAGACCGCATTTAGAGCTGCTGGCTGACATCGACCCCAGCCCAGATGCCCCGGCACCAACATGGGAGCAACTTGACAAAGGACTCGTAGCTGTAAAGACGGTTGTGCACGGCTTAGTGGACTTCATCCAGAACCACAGCAAGAAAGGAGGAGATCCACAGCAGGCCCCTCAGCACAGTAAATACAAGACCTACATGTGTCGAGATATGAAGCAGAAAGGAGGTTGTCCCAGAGGAGCCAGCTGCACTTTTGCCCATTCCCAGGAGGAGCTGGAAAAGTATCGCAAGATGAACAAGCGGTTGCCCACCAGGAAGACCTTAAGCCAGTCCCTGACGCAGCTTAATGACATGGACATGGTTTGCCCCTCAAACCTTCTTCCTGATGAGGGTTTGGGTGTGGAGGGTCTGGTCCATAAACCTGGACTTGTCACTAATGGCATCATACATGTGGGTCCTGGATCCGGGCTGCTGATCTCACGAGGTGCAGATCCTTCATATGAACCAGTACGCAAGCTGGGGAAGCCGGAGAGCGGAGGCAGCCTCAGTGCTCCGGATTCACCTCCAGACTCATTGGATCCCATGCCTAAGGTGATGTTGCCTGCACCTCCTCATCCTAGAGGGTCCAGGGAGAGTCTAGCTAGCCATAAACACCTGTCTACTGCCTCCAGAATTGCCCAGATACCTCAGTACCCTCCACATCAGCTCGAGGGCTATTACTCAGACTCCAGACCACCACATTCTGCCTCCCAGTACGAACCTTCTCAGTATCCTGCAGgGAACTCCTACAATTATTCACACATGCATCGCTACGCCCGTAACCCTGGTCCCCCTGCTGACCCAGCCTACCCAGACTCCTATCCACTTTCCTATGCTTCAGAACGCCAGTATGCAACTCCACCCTCTGACCCTCGGTATAGCTACCCACCGCATCACGACGGCGGCCGCCGCCACCCAGCGTACGGAGGCCACCTCCCACCCCAGTCCTACACACGGGATGAGCTGGGGCACAGGAGTCCAGTGCCTATGGACgcacccccaccaccacagCCCCAAACAGCAGGGGCCTCCGCCTACCTTCCAGAGTCATCACGAGACCGATACAACGCTCAGATCTACAACCACCACGGCCAGAGCAGATCTCACAGCAGGgctgcCTACCCTAGACCACAGCCCTCCTTGGATGACCTGCACCGTCGAAGAAAGGAAATCATGGCTCAGCTAGAAGAGGTTAAAGTTGTCTCCCCTCCTCCTTTTGGCTCTTCTTCAAACCTGGCCCCACCTTATGAACCAAGCTACAGCCAAGAAGCCAGAGGACAAAGCCATTACATGGAAGAGAACTCCACTGCATTCGAGAGCTTCAGGGAGCCAGACTACGCTGCTCAGTACTCCCCGTGGTCATGTGGCACCTTTGTTCCATACATCGGCAAGGATATGAAATCCAAAGAGGGCATGGCTGCAGGCTACATGGAAATGCAGAATGTAGAAAAGAGCCTGAGAGATCCTGCATTGGAGCTGCAGCGCAGGGCACCTGAGGTCAAAGACGACGACCCCATCATTCCGTTCGGCTCACTGCCCACTGTTTCGCGCTTCGGAGCCATCTCCCGCACGTCCAAATCTGGCTACCAGCCTGCTGGCCTGATGCCAGGCCACCCAGCCAAACACACTGCCAGTGCGGTTGATTATAACTATGGAAATCATGGAGGTTGGAGTGAAGCTTCATACCCCCAACATCAAACCATGCCATCTCAGGGATACTTCAGTGAACGCCTGCCCCCTGCTGGCCCGGATCGGGAACAGCTGAGGATGGAACTACAGCAGGTCAACCAACAGATCACTCAGCAGACTCGGTCTATAGAGAGCTCCAGCAGTGTGGTGGCTATGCAGAGAGAGCCTGTCTCTATGGCCGGCCAGTCCGCTCCAGTGGAGTGGTCCACAGCTGGCGTGTCCAGTGAGCAGCTGAGCCTGGAGCTGCATCAGGTGGAGAGAGAGATCGGCATGAGGACGAGGGAGATGGCCTTGGAGGGCCATGGGATGAAGTATAAATGTGAAAATGGACAGAGTGATCATGGCATGCAGCGAGAGGAGCACCAGCTAGCCCTCAGCGAGGGCTCAAATGGCTCGAGTTCTGTGGTGCAGGACTGCGGTTtgggcagcagcagcatgtcCTCTCTGACCAGCAAGACGTCCTCCCTGAGCCTGTCATCCGATCTGGTGGCAAGCAGCCCGGACCTGTCGAAGAATGGGGTGGTTCACACATGTTCCTAGCCCATTCTCTTTGTCTTATGCTACCTGCTGCCCAAGACTAGTGTggcccttctctctttctctctctctctctctctctctgtctttttctctctttcttcaaaAAGACTTTGGTCTTTAGCTGGTCTTACCTATTCATATTCACTTCAAACATCCCCTACAAGGCCACATTACAGCATCCCTCTGTCCAGCATGCTCCTGCTTTTATTGGATGACTTCTATCGTTCTTGCCGCCGCAGTATTGGGATGTTGAATATCCCAGATTTCACATTTTGTTGAGGATAAGGGCTACGTTGGTACAATCTGGATTTAAAACAACCACTAATGGACAACCAGGCAGATGTGGGTGGgattcatttaaatttaatgaCAAACAAACTGGCACAGTCAGACTTacgggattttttttttccataagcAGTATCTGCcatttattcagttatttttaattttttgttctaTGAATGAatttgctttccttttttttctatgaCAAAGCGTATCTCTCATTGCCTTGTAAGTCTCAGGGCATCTGAGAAACATTTTAGCAA
>XM_007240115.3
gcgcatgcgcgccGGCTGTAGTTTGTAGCCGCTCAGAGCAAACACACCCCTGCCGAGATGGCGACCGAGATTATGCTGCTGTATTTGGCCATAAATCGCTAAAGAACTGTTATGTATTCAGCACCGTGTGCTAAACGTCCGCAATGCCTGAAGATCTTTGAAAAGCTGGACGTTCAGAAGAGTGTTTCCGATTCCCGTGGAATCTATAGGACGTTTGccctttttgtttttaacaaaacGTACCCAAGCCTGACCGTAAAGGAAGGCGCAGAGCTGAAAGGATACCTGGGCCGCCAGCGCATCGGAGATCCCCTCTCGTTACGATGCCCGTTCAAGCGCCACAATGGACGGAGTTTCTGTTGTGTCCCATCTGCACGCAAACGTTCGAGGAGAATGCCCGCAAGCCTATCAGCTTGGGCTGCGGACACACCGTGTGCAAGATGTGCCTGAACAAGCTGCACCGCAAGGCTTGCCCCTTCGACCAGACCACCATCAGCACCGACATCGAGCTGCTGCCTGTCAACACCGCCCTGCTGCAGCTGGTCTGTGGTCAGgtGCCCAAGTCTCAGCCCGTCACCTTGGTGAGAGGAGCAGAAGACACCAAGCATTATGACGAAGCTCGCACCTGTGTGGAGGAGCTGGCTCTCTACCTCAAACCCCTCAGCAACACCAGAGGTGTGGGGTTGGGCAGTGCAACCCAGAGTCTTCTCAGCAGGCCCATGCAAAGGAAACTGGTGACTCTAGTACACTGCcagctggtggaggaggagggtcGTATCCGGGCCATGCGGGCTGCTCGCTCTCTAGGGGAACGCACAGTGACCGAGCTCATCCTGCAGCACCAAAACCCACAGCAGCTCTCCTCCAACCTGTGGGCTGCAGTCCGAGCTCGGGGCTGCCAGTTCCTCGGCCCTGCTATGCAGGAAGAGGCCCTGAAGCTCGTCTTGTTGGCGTTAGAGGATGGATCAGCCCTCTCCCGCAAGGTTCTGGTTTTGTTTGTGGTCCAGAGGCTGGAGCCCCGCTTTCCTCAGGCTTCTAAAACCAGTATAGGACATGTGGTGCAGCTTCTTTACAGAGCCTCCTGTTTTAAGgTGACTAAGCGAGACGAGGACTCCTCTTTAATGCAGCTGAAGGAGGAGTTCCGCACGTACGAGGCTCTGAGGAGAGAGCACGACTCTCAGATCGTCCAGATTGCCATGGAGGGAGGCTTACGTATAGCTCCTGACCAGTGGTCCTCCCTGCTCTATGGAGACCAGTCCCATAAGTCCCACATGCAGTCCATCATAGATAAGCTGCAGACCCCAGCGTCCTTTGCCCAGAGTGTGCAGGAGCTCACCattgccctgcagagaacaggAGACCCAGCCAACCTCAACCGCCTCAGACCGCATTTAGAGCTGCTGGCTGACATCGACCCCAGCCCAGATGCCCCGGCACCAACATGGGAGCAACTTGACAAAGGACTCGTAGCTGTAAAGACGGTTGTGCACGGCTTAGTGGACTTCATCCAGAACCACAGCAAGAAAGGAGGAGATCCACAGCAGGCCCCTCAGCACAGTAAATACAAGACCTACATGTGTCGAGATATGAAGCAGAAAGGAGGTTGTCCCAGAGGAGCCAGCTGCACTTTTGCCCATTCCCAGGAGGAGCTGGAAAAGTATCGCAAGATGAACAAGCGGTTGCCCACCAGGAAGACCTTAAGCCAGTCCCTGACGCAGCTTAATGACATGGACATGGTTTGCCCCTCAAACCTTCTTCCTGATGAGGGTTTGGGTGTGGAGGGTCTGGTCCATAAACCTGGACTTGTCACTAATGGCATCATACATGTGGGTCCTGGATCCGGGCTGCTGATCTCACGAGGTGCAGATCCTTCATATGAACCAGTACGCAAGCTGGGGAAGCCGGAGAGCGGAGGCAGCCTCAGTGCTCCGGATTCACCTCCAGACTCATTGGATCCCATGCCTAAGGTGATGTTGCCTGCACCTCCTCATCCTAGAGGGTCCAGGGAGAGTCTAGCTAGCCATAAACACCTGTCTACTGCCTCCAGAATTGCCCAGATACCTCAGTACCCTCCACATCAGCTCGAGGGCTATTACTCAGACTCCAGACCACCACATTCTGCCTCCCAGTACGAACCTTCTCAGTATCCTGCAGgGAACTCCTACAATTATTCACACATGCATCGCTACGCCCGTAACCCTGGTCCCCCTGCTGACCCAGCCTACCCAGACTCCTATCCACTTTCCTATGCTTCAGAACGCCAGTATGCAACTCCACCCTCTGACCCTCGGTATAGCTACCCACCGCATCACGACGGCGGCCGCCGCCACCCAGCGTACGGAGGCCACCTCCCACCCCAGTCCTACACACGGGATGAGCTGGGGCACAGGAGTCCAGTGCCTATGGACgcacccccaccaccacagCCCCAAACAGCAGGGGCCTCCGCCTACCTTCCAGAGTCATCACGAGACCGATACAACGCTCAGATCTACAACCACCACGGCCAGAGCAGATCTCACAGCAGGgctgcCTACCCTAGACCACAGCCCTCCTTGGATGACCTGCACCGTCGAAGAAAGGAAATCATGGCTCAGCTAGAAGAGGTTAAAGTTGTCTCCCCTCCTCCTTTTGGCTCTTCTTCAAACCTGGCCCCACCTTATGAACCAAGCTACAGCCAAGAAGCCAGAGGACAAAGCCATTACATGGAAGAGAACTCCACTGCATTCGAGAGCTTCAGGGAGCCAGACTACGCTGCTCAGTACTCCCCGTGGTCATGTGGCACCTTTGTTCCATACATCGGCAAGGATATGAAATCCAAAGAGGGCATGGCTGCAGGCTACATGGAAATGAATGTAGAAAAGAGCCTGAGAGATCCTGCATTGGAGCTGCAGCGCAGGGCACCTGAGGTCAAAGACGACGACCCCATCATTCCGTTCGGCTCACTGCCCACTGTTTCGCGCTTCGGAGCCATCTCCCGCACGTCCAAATCTGGCTACCAGCCTGCTGGCCTGATGCCAGGCCACCCAGCCAAACACACTGCCAGTGCGGTTGATTATAACTATGGAAATCATGGAGGTTGGAGTGAAGCTTCATACCCCCAACATCAAACCATGCCATCTCAGGGATACTTCAGTGAACGCCTGCCCCCTGCTGGCCCGGATCGGGAACAGCTGAGGATGGAACTACAGCAGGTCAACCAACAGATCACTCAGCAGACTCGGTCTATAGAGAGCTCCAGCAGTGTGGTGGCTATGCAGAGAGAGCCTGTCTCTATGGCCGGCCAGTCCGCTCCAGTGGAGTGGTCCACAGCTGGCGTGTCCAGTGAGCAGCTGAGCCTGGAGCTGCATCAGGTGGAGAGAGAGATCGGCATGAGGACGAGGGAGATGGCCTTGGAGGGCCATGGGATGAAGTATAAATGTGAAAATGGACAGAGTGATCATGGCATGCAGCGAGAGGAGCACCAGCTAGCCCTCAGCGAGGGCTCAAATGGCTCGAGTTCTGTGGTGCAGGACTGCGGTTtgggcagcagcagcatgtcCTCTCTGACCAGCAAGACGTCCTCCCTGAGCCTGTCATCCGATCTGGTGGCAAGCAGCCCGGACCTGTCGAAGAATGGGGTGGTTCACACATGTTCCTAGCCCATTCTCTTTGTCTTATGCTACCTGCTGCCCAAGACTAGTGTggcccttctctctttctctctctctctctctctctctgtctttttctctctttcttcaaaAAGACTTTGGTCTTTAGCTGGTCTTACCTATTCATATTCACTTCAAACATCCCCTACAAGGCCACATTACAGCATCCCTCTGTCCAGCATGCTCCTGCTTTTATTGGATGACTTCTATCGTTCTTGCCGCCGCAGTATTGGGATGTTGAATATCCCAGATTTCACATTTTGTTGAGGATAAGGGCTACGTTGGTACAATCTGGATTTAAAACAACCACTAATGGACAACCAGGCAGATGTGGGTGGgattcatttaaatttaatgaCAAACAAACTGGCACAGTCAGACTTacgggattttttttttccataagcAGTATCTGCcatttattcagttatttttaattttttgttctaTGAATGAatttgctttccttttttttctatgaCAAAGCGTATCTCTCATTGCCTTGTAAGTCTCAGGGCATCTGAGAAACATTTTAGCAA

Function

symbol description
rc3h1 Enables CCR4-NOT complex binding activity; RNA binding activity; and ubiquitin-protein transferase activity. Involved in nuclear-transcribed mRNA catabolic process; protein polyubiquitination; and regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay. Located in P-body.

NR:

description
PREDICTED: LOW QUALITY PROTEIN: roquin-1-like

GO:

id name namespace
GO:0046872 metal ion binding molecular_function

KEGG:

id description
K15690 RC3H; RING finger and CCCH-type zinc finger domain-containing protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007240113.3 True 4195 mRNA 0.54 20 14026773 14052048
XM_007240114.2 False 4191 mRNA 0.54 20 14026773 14046596
XM_007240115.3 False 4192 mRNA 0.54 20 14026773 14052048

Neighbor

gene id symbol gene type direction distance location
serpinc1 serpinc1 coding downstream 9788 14005926 ~ 14016985 (-)
dph5 dph5,LOC107715097,LOC106613590 coding downstream 113561 13892691 ~ 13913212 (-)
dbt dbt,LOC107715105,LOC107588055,LOC107669841,LOC107653638,LOC107592709 coding downstream 333407 13683295 ~ 13693366 (-)
LOC103036543 NA coding downstream 343573 13680717 ~ 13683200 (-)
lrrc39 lrrc39,LOC107592708,LOC107653639 coding downstream 347689 13672906 ~ 13679084 (-)
stil NA coding upstream 1475 14053523 ~ 14073444 (-)
LOC103040192 NA coding upstream 93087 14145135 ~ 14148466 (-)
LOC103042854 LOC103042854,LOC108424983 coding upstream 360932 14412980 ~ 14421108 (-)
LOC103043174 lpl,LOC108271131,LOC107588078,LOC107715086 coding upstream 379233 14431281 ~ 14441363 (-)
polrmt LOC101483880 coding upstream 493894 14545942 ~ 14663105 (-)
G42430 s1pr1,LOC107715096,LOC107592715,LOC107669844 non-coding downstream 41712 13981970 ~ 13985061 (-)
G42415 NA non-coding downstream 160434 13861654 ~ 13866339 (-)
G42414 NA non-coding downstream 187765 13837030 ~ 13839008 (-)
G42411 NA non-coding downstream 192574 13830953 ~ 13834199 (-)
G42375 NA non-coding downstream 231456 13791891 ~ 13795317 (-)
G42465 NA non-coding upstream 79667 14131715 ~ 14134393 (-)
G42500 mrpl54,LOC102788358 non-coding upstream 254675 14306723 ~ 14309624 (-)
G42519 NA non-coding upstream 293773 14345821 ~ 14346308 (-)
LOC103043998 NA non-coding upstream 404799 14456847 ~ 14459618 (-)
G42674 NA non-coding upstream 564368 14616416 ~ 14666365 (-)
tm2d1 tm2d1,LOC107669801,LOC107653653,LOC107715116,LOC106574044,LOC107731529 other downstream 863968 13142373 ~ 13162805 (-)
nr2c2ap nr2c2ap,LOC107554809,LOC107687739,LOC107728548 other downstream 2253671 11767698 ~ 11773102 (-)
borcs8 borcs8,LOC107599453,LOC107554813,LOC107728595 other downstream 2264512 11756447 ~ 11762261 (-)
mef2b mef2b other downstream 2294877 11720126 ~ 11731896 (-)
LOC103041480 NA other downstream 2347754 11618444 ~ 11679019 (-)
fam32a fam32a,LOC107757479 other upstream 251492 14303540 ~ 14305976 (-)
G42516 NA other upstream 283882 14335930 ~ 14339171 (-)
G42661 NA other upstream 410625 14462673 ~ 14526890 (-)
G42712 LOC108438667,LOC105021477,LOC107674533 other upstream 808506 14860554 ~ 14861338 (-)
socs7 socs7 other upstream 897836 14949884 ~ 14966800 (-)

Expression


Co-expression Network