mrpl45 (mrpl45,LOC107680544)


Basic Information

Item Value
gene id mrpl45
gene name mrpl45,LOC107680544
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035901.1
NCBI id CM008304.1
chromosome length 40584741
location 14997000 ~ 15002143 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007240146.3
GTCTCCACACGTGAGGAAACACCGCCGCCCAAAGAAGAAGCGGGAGGCGATCATGGCGGCGTCCATGTGTAGGACGTTACGGATCTTTAATCAGCCAGCAGGTCCCGGTTTAAAGTGTGTTGCTTCCTTACTGGAAGTGCAGTTAGCCCAGCCTGTGGTGATTCCTGTACGGACAAAGAAGCGCTACTTCATCCCGCCCTCAGTTAGCATTAAGAGTAGGAGCCTCGAGGAGCAGGAGGCAGCGGTTCGGGCTGCAGGTGTGGTCGCCAGGCAGCAGTACATCGAGAGACCCATCAACATTTCATGCACAGCTGGAATCGTGGATCCATACATCCCTCCCGAAGGTGATGCTCGTCTCTCCACTCTGTCTAAAGAGGGTCTGAAACAGCGCACAGAGCAGCTGCGACAAAGTGCTGCCTCACAGCTAGCctTTCGTAAGATAAAGGACCATGACTCTGAGTTCTCGTCTAAGGGATTTGCTGTTAAAGCTCAGGAAATCTTCATTGAGGCTCATGCGGCCCTGACAGAGTTCAACAAAGAGAAACTTCATTCATTGGTCACAGAGCGATGTTACCCGGAAATGGTTCGAGGGAATCGGtataaaacactgcactggcGCTTTATTGAATCACTGGAGCCGCCGAGGGTGGTTCATGCCCGATGCCCCGACATGGTCAGCAAGGGCAATATGTATGGTCAGGTGACTGTTCGCATGCACTCCAGACAGACGCTGGCAATCTATGACCGATTCGGCCGATTGATGCTGGGGGATGAGGAGGAGCCCAGGGATGTGTTGGAATACCTGGTGATGGAGAGGCACCTAATAAACCCGTATGGATGCTGGAGGCTACATGGCAAGATTGTACCAGCCTGGGCACCACCTAAAGACCCCATCATTAAGACTGTCATGATCCCAGGCCCTAAACTCAAGCCAGAAGAAGAGTTTGAAAGTCTCAATTATGAGGTACCCAATCCCGAGGCAGTGCAATGGCACAAATAATCCAGAGGGTGGTGCATTCATGCTTTATGTACAGACTCTGTGTTGACTTATGAAATAAACTATGTTCATGTTCTGTC

Function

symbol description
mrpl45 Predicted to be located in ribosome. Predicted to be active in mitochondrion. Orthologous to human MRPL45 (mitochondrial ribosomal protein L45).

NR:

description
39S ribosomal protein L45, mitochondrial-like

GO: NA

KEGG:

id description
K17426 MRPL45; large subunit ribosomal protein L45

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007240146.3 True 1077 mRNA 0.51 8 14997000 15002143

Neighbor

gene id symbol gene type direction distance location
sp2 sp2,LOC107718867 coding downstream 50205 14934895 ~ 14946795 (-)
abcc10 abcc10 coding downstream 63221 14911741 ~ 14933779 (-)
LOC103027360 NA coding downstream 88221 14892476 ~ 14908779 (-)
LOC103046425 NA coding downstream 105610 14879013 ~ 14891390 (-)
cdc6 cdc6,LOC102777898 coding downstream 119768 14870351 ~ 14877232 (-)
LOC103022633 npepps,LOC107718863,LOC107674532,LOC107680533,LOC107753845 coding upstream 3264 15005407 ~ 15028619 (-)
zrsr2 zrsr2,LOC107729896,LOC107602790 coding upstream 37958 15040101 ~ 15045271 (-)
LOC103024303 txlng,LOC107665847,LOC107602792,LOC107723067 coding upstream 49709 15051852 ~ 15061357 (-)
LOC103025036 chrna4,LOC446090,LOC107594120,LOC105920314 coding upstream 96229 15098372 ~ 15109324 (-)
LOC103026677 LOC108438650,LOC108270818,LOC107723066 coding upstream 171916 15174059 ~ 15205251 (-)
G42722 NA non-coding downstream 49151 14947620 ~ 14947849 (-)
G42711 NA non-coding downstream 128277 14867165 ~ 14868723 (-)
G42714 NA non-coding downstream 138567 14834176 ~ 14858433 (-)
LOC103044803 NA non-coding downstream 169134 14799278 ~ 14827866 (-)
G42685 NA non-coding downstream 326648 14667725 ~ 14670352 (-)
G42746 rtel1 non-coding upstream 81333 15083476 ~ 15085974 (-)
G42830 bt3l4,btf3l4,LOC103026176,LOC107655993,LOC105028135,LOC107562065 non-coding upstream 136185 15138328 ~ 15141393 (-)
G42834 LOC108438649 non-coding upstream 141303 15143446 ~ 15146842 (-)
G42835 NA non-coding upstream 146136 15148279 ~ 15148791 (-)
G42841 mknk1 non-coding upstream 158660 15160803 ~ 15234306 (-)
socs7 socs7 other downstream 30200 14949884 ~ 14966800 (-)
G42712 LOC108438667,LOC105021477,LOC107674533 other downstream 135662 14860554 ~ 14861338 (-)
G42661 NA other downstream 470110 14462673 ~ 14526890 (-)
G42516 NA other downstream 657829 14335930 ~ 14339171 (-)
fam32a fam32a,LOC107757479 other downstream 691024 14303540 ~ 14305976 (-)
G42850 NA other upstream 215814 15217957 ~ 15218822 (-)
G42894 NA other upstream 413512 15415655 ~ 15415999 (-)
LOC111192556 NA other upstream 423244 15425387 ~ 15489721 (-)
G43173 LOC108437262 other upstream 1696806 16698949 ~ 16701352 (-)
smim7 smim7,LOC107568062,LOC107703137,LOC107658516 other upstream 2240221 17242364 ~ 17244709 (-)

Expression


Co-expression Network