LOC103022633 (npepps,LOC107718863,LOC107674532,LOC107680533,LOC107753845)


Basic Information

Item Value
gene id LOC103022633
gene name npepps,LOC107718863,LOC107674532,LOC107680533,LOC107753845
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035901.1
NCBI id CM008304.1
chromosome length 40584741
location 15005407 ~ 15028619 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007240147.3
TGACGTCATTTTAAGACGGGAGCGCGCACGTACCCGCGTCCAGCTATTTCGGTCTATTGGAAGTGAGAGGGGAGGACGGGAGCGAGTTAGCGACACATCCCACGGGTTTTATGTTGCTGCTTTTGAGCCGTCAAGTGTCTCTGTCACTCGTCCGGCAAGTCACACCCCGCAGACTGAGTTCTCCGCTGAAGGCCGCCCCGCTGACTCTGAGATTAAGCGTTAGACTCTGCTCGGTCTCTGCTAAAGCTACCAGCCAACATTTAGGAGTCACCATGCCTGAACGGAGGCCCTTCGTACGGCTGCCCACCGACGTCTATCCCGTCAACTACGGGCTCAGTCTGAAGCCCGACCTCATCGACTTCACCTTCGAGGGCAAGCTGGAGGCGGCGGTGGAGgTTACACAAGGGACAAACCAGATAGTGATGAACTGTGCTGATATAGACATTATAACTGCATCTTTTGCACCAGAAGGCGGGGAAGAAATTAATGCTACAGGATTCAACTATCAGAACGAGGATGAGAAGGTCACTTTGTCATTCCCCAGCGCTCTTCAGAAAGGGTCGGGTACGCTAAAGATTGATTTTGTTGGAGagctaaatgacaaaatgaaaggattttacaGAAGTAAATATGCAACTCCTTCAGGAGAAATCCGCTACGCTGCTGTCACACAGTTTGAGGCTACGGACGCTCGCCGAGCTTTTCCCTGTTGGGACGAGCCAGCTATCAAAGCCACCTTTGACATCACCCTCATTGTCCCCAAGGACCGAGTAGCCTTGTCAAATATGAATGTTATTGATCGAAAGCCATACCCAGAAGACGACAGTTTGGTGGAGGTGAAGTtctccaccacacccatcatgtCCACGTATCTGGTGGCTTTTGTCATTGGAGAATATGATTTTGTGGAGAGCCAGTCGTCCGACGGTGTGACGGTCCGTGTGTACACGCCGGTGGGGAAAGCAGAGCAAGGGAAATTTGCACTGGAGGTGGCTACAAAGACCTTACCTTTCTACAAAGACTATTTCAGTGTTCCTTATCCATTGCCTAAAATTGATCTAATAGCTATTGCTGATTTTGCTGCTGgTGCCATGGAAAACTGGGGCCTTGTTACTTACagGGAGACTGCTCTGCTAATCGACCCAAAGAACTCGTGTGCATCCTCGCGTCAGTGGGTGGCCCTGGTGGTGGGCCACGAGTTGGCACACCAGTGGTTTGGGAATTTGGTTACTATGGAATGGTGGACCCATTTGTGGCTTAATGAAGGCTTTGCATCGTGGATAGAGTACCTGTGTGTGGACCACTGTTTTCCTGAATATGACATCTGGACACAGTTTGTGTCTGCTGACTACACCAGGGCTCTGGATCTGGATGCCCTTGATAACAGTCACCCGATTGAGGTTAATGTAGGACACCCCTCAGAAGTGGATGAAATCTTTGATGCCATATCGTACAGCAAAGGAGCCTCCGTTATACGCATGCTGCACAACTACATAGGAGATGAggATTTTAGGAAGGGAATGAATGCTTACCTTTTAAAGTTTCAGCACAAAAATGCATCTACAgagGACCTCTGGGACTGTCTGGAGCAGGCTAGTGGGAAGCCCATTGCAGCAGTGATGAACTCTTGGACCAAACAGATGGGATTCCCAATTATTGTAGTAGACCAAGAGCAGcAAGGAGAAGATCGGGTGCTGAAAGTATCTCAGAGAAAGTTCTGTGCTAGTGGACCACACAACGGGGAGGATTGCCCTAGCTGGATGGTCCCCATAAGCATCTGCACCAGTGAGGACCCCAGCTGCTCCAAGATAAAAGTTTTGCTGGACCAGCATGAAAGCACTGTCACCATCCCTAACATTGGACCAGATAAGTGGGTCAAGATAAATCCAGGTACAGTGGGCTTCTACAGGATCCAGTACAGCTCTGGCATGCTAGAGAGTCTGTTACCAGGCATCCGAGACCTCACCCTGCTCCCTGTGGACCGCCTGGGTCTGCAGAACGACCTTTTTTCCCTGtctcgcGCTGGTATGATCAGCACAGTGGAGGTGCTGAGGCTGATGGAGGCATTCGTGAACGAGCCTAACTACACTGTGTGGAGCGATCTGAGCTGTAACCTGGGCGTGCTCTCCTCTCTGCTCTCCTACACCGAATTTCATGAGGAGATCCAGGAGTTCATCAGAGACCTGTTCACCCCCATCGGCTCCAAGCTGGGCTGGGACAGCAAATCTGGTGAAGGTCACTTGGATGCTCTGCTGCGGGGACTGGTTTTGGGCAAGCTGGGTAAGGCGGGACACAAGGCCACCTTGGACGAGGCTCGGAGGAGATTTAAGGAGCATGTGGAAGGCAAGCAGATCCTCTCTGCAGACCTCAGGAGTCCAGTTTACCTAACAGTTCTGAAGCACGGAGACAGCTCGACGCTGGACACAATGCTAAagCTTCATAAGCAAGCAGACATGCAGGAAGAAAAGAATCGCATAGAGAGAGTTCTTGGAGCAATCTCCGCTCCTGAGCTCATCCAGAGAGTGCTAAACTTTGCCCTTTCGGAAGATGTGCGTCCCCAGGATACAGTGTCTGTGATTGGAGGCGTGGCTGGTAGTAGCAAGCAAGGTCGCAAAGCAGCTTGGAAATTTGTCAGAGACAACTGGGAGGAGCTTCATAACCGTTACCAGGGTGGATTCCTCATATCACGACTCATCAAGctcACTGTTGATGGGTTTGCAATTGACAAAATGGCTGCAGAAGTAAAGaGTTTCTTTGAGAGTCACCACGCGCCAGCGGCTGAGCGTACGGTCCAGCAGTGCTGCGAGAACATTCTCCTGAACGCAGCGTGGCTCAAGCGGGACGCAGACGACATCCACAAGTACCTACTGCAGCGCAAGGTGCCCCCAGTCTGACCCCACCCCCACCAGTGACCCTGGCCTCTCCTGacctactcactcactcactcagatCTCCCAGCAAATCATCGCTGCCTCCGCCCCTCCGCCGACCAGAGAGCGAGAGCGTCCAGAAACCAAAcgggctttgtttttttttgttttttttctatatccAGTGACAAACAGAAACGAAGACTACAGCACTGCAGCTCCATCTTGAGAGTTACCCAAGAGAAATCAAAATCGAGACGGAAGAACTAAAACTGTCAGaagtgtgatgatgatgatgaggaatGCCGTACCCTGTTCTGCCTGCTGGAGTTGATACACGTGCAAAGATGTGAatggaaatagaaaataaattccACATCTGGAATTTtgtcctttcttttcttttttcatttttaaagatgGTAACGCATGCATATGCTTTTTACAGTTAGCATTCGTTCAGTACAGCACAGCGAGACATTTCAGTACGCACGTTCACAGTAGTAGAACTGTGAACTTGTTTTTGCTCTTCCTCTTATCTCTTTAACAAGAGGCTTGCTTGCAACGTTTGATATCAATGATTTAaagtttctttctttactttttttattttattttaaatgtacgtTTTCTGTGCAAACAGTAATCTTCTGCCGTGTCATCCATGATGATGGCTGTAGCCTGATTTACCTAGAACCACCCTGAGGTGTGGCTTAGCAGAACGGGGTGAAAGGTCATGGCGACGTGGTTGTAGAATGGACATTTAACGGCAACGGCACTGATCCCCAACGCTACAACGGTTAGAACCGACCGAGCAGCGTAAGcatggtactgtatgtatattatataatgcgAGTATTCTTGCTGAGTCTTTCAGCTGATTTGAATCGTCATACATTCTTTCCTTCTGTATGAAAAGCATCCCCTCTCCTCCACAGCACACTCCCAGTGGCCTGTCCCCCTCATGCAACTATAGAATGGCAAGATAAGCAGCTGAGAAAGTCATTTAGGATAGCCCTGCATCTGCCACATAAAAACAGAGTTgtaaaaacaatgcattttataaagtgtatattcaatgattattttaatgttgtgaAAATGGCATCTGAAGTAGAACGAACGAACATACTTGGAACGGGGCCCTTGGAATATATCAGCTCAGTTTAGTCCAAGACAAGGCCCACTTTAAACTCTGAAGTGattttgatgatggtgatgatgataataatgatgattatgatgatcaTGATGATTTTCTCTGTTATTGTGCTCCGAGGCCTTAAATCGGTAAAACTGGTTCGCAATAATGATTATCCAAACCAGAGTGGTAATTGTACTTAAACATGCAAGTAAATATCAATCAGATGTTCCAGATAAACGTAGGCTTGTTGAGCAAGTATATCTATTAAGACTATATCTGATGTGGCTCGTAAATTTACAAGAGATCAAACTGTCTGACTCTTTCCCTGAAACATTTGTTGTGCTTTTGTTTAAGGATACAATTGGTGTTCATTAAAGATGAAAACTACTCTGAAGTAGTAAAACGA

Function

symbol description
npepps Enables aminopeptidase activity. Predicted to be involved in peptide catabolic process and proteolysis. Predicted to be active in cytoplasm. Is expressed in nervous system; pectoral fin musculature; and proliferative region. Orthologous to human NPEPPS (aminopeptidase puromycin sensitive).

NR:

description
PREDICTED: puromycin-sensitive aminopeptidase

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0004177 aminopeptidase activity molecular_function
GO:0008237 metallopeptidase activity molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K08776 NPEPPS; puromycin-sensitive aminopeptidase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007240147.3 True 4420 mRNA 0.48 23 15005407 15028619

Neighbor

gene id symbol gene type direction distance location
mrpl45 mrpl45,LOC107680544 coding downstream 3264 14997000 ~ 15002143 (-)
sp2 sp2,LOC107718867 coding downstream 58612 14934895 ~ 14946795 (-)
abcc10 abcc10 coding downstream 71628 14911741 ~ 14933779 (-)
LOC103027360 NA coding downstream 96628 14892476 ~ 14908779 (-)
LOC103046425 NA coding downstream 114017 14879013 ~ 14891390 (-)
zrsr2 zrsr2,LOC107729896,LOC107602790 coding upstream 11482 15040101 ~ 15045271 (-)
LOC103024303 txlng,LOC107665847,LOC107602792,LOC107723067 coding upstream 23233 15051852 ~ 15061357 (-)
LOC103025036 chrna4,LOC446090,LOC107594120,LOC105920314 coding upstream 69753 15098372 ~ 15109324 (-)
LOC103026677 LOC108438650,LOC108270818,LOC107723066 coding upstream 145440 15174059 ~ 15205251 (-)
LOC103028830 LOC108438687 coding upstream 229950 15258569 ~ 15265535 (-)
G42722 NA non-coding downstream 57558 14947620 ~ 14947849 (-)
G42711 NA non-coding downstream 136684 14867165 ~ 14868723 (-)
G42714 NA non-coding downstream 146974 14834176 ~ 14858433 (-)
LOC103044803 NA non-coding downstream 177541 14799278 ~ 14827866 (-)
G42686 NA non-coding downstream 336065 14668729 ~ 14669342 (-)
G42746 rtel1 non-coding upstream 54857 15083476 ~ 15085974 (-)
G42830 bt3l4,btf3l4,LOC103026176,LOC107655993,LOC105028135,LOC107562065 non-coding upstream 109709 15138328 ~ 15141393 (-)
G42834 LOC108438649 non-coding upstream 114827 15143446 ~ 15146842 (-)
G42835 NA non-coding upstream 119660 15148279 ~ 15148791 (-)
G42841 mknk1 non-coding upstream 132184 15160803 ~ 15234306 (-)
socs7 socs7 other downstream 38607 14949884 ~ 14966800 (-)
G42712 LOC108438667,LOC105021477,LOC107674533 other downstream 144069 14860554 ~ 14861338 (-)
G42661 NA other downstream 478517 14462673 ~ 14526890 (-)
G42516 NA other downstream 666236 14335930 ~ 14339171 (-)
fam32a fam32a,LOC107757479 other downstream 699431 14303540 ~ 14305976 (-)
G42850 NA other upstream 189338 15217957 ~ 15218822 (-)
G42894 NA other upstream 387036 15415655 ~ 15415999 (-)
LOC111192556 NA other upstream 396768 15425387 ~ 15489721 (-)
G43173 LOC108437262 other upstream 1670330 16698949 ~ 16701352 (-)
smim7 smim7,LOC107568062,LOC107703137,LOC107658516 other upstream 2213745 17242364 ~ 17244709 (-)

Expression


Co-expression Network