LOC103036470


Basic Information

Item Value
gene id LOC103036470
gene name NA
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 14316407 ~ 14321860 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU14152
GGCAGACAGCAGGACAGACTGAAGGACAAACAAgcagaggagaaagagaaagtggacTGGAAGTCGATcagcaaagaaaagaacaaacaacTCCACCTGAGTAGGGATGGCCTCGTCGATGGTGGCACGGCGGGTCCTGGCTGCTGCATCACACGGCCAGGAGGGAGGAGCAAAGACCTGGAAGATCCTGTCGTTCGTGGTGGCCTTGCCGGGCGTGGCTGTATGCATGGTCAATGCTTACCTGAAGATGACCTCTCACTCCCACGAGACACCAGAGttcatacctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctc
>XM_022674130.1
GCCTGCTGGCAGACAGCAGGACAGACTGAAGGACAAACAAgcagaggagaaagagaaagtggacTGGAAGTCGATcagcaaagaaaagaacaaacaacTCCACCTGAGTAGGGATGGCCTCGTCGATGGTGGCACGGCGGGTCCTGGCTGCTGCATCACACGGCCAGGAGGGAGGAGCAAAGACCTGGAAGATCCTGTCGTTCGTGGTGGCCTTGCCGGGCGTGGCTGTATGCATGGTCAATGCTTACCTGAAGATGACCTCTCACTCCCACGAGACACCAGAGttcatacctctctctctctctctctctcttcagcccTGGCCCTGGGGTGATGGAAACCACTCTCTCTTCCACAACTCTCACACCAACGCCCTGCCCACTGGTTATGAGGACAGTCACCACTGAGAACAGCGCCACCTGGTGTGCAGGATTAACTTTGCACCCTAAACCCTGTTCCTGCTCTGAGTGCTCAGCGGCTCAGCTTCTGAATGACACAAATAAACCACGTGTCTttttataaacatgaatataatgtgtttaacacaaatatataataaataatcattcTAATTTC

Function

GO:

id name namespace
GO:1902600 proton transmembrane transport biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0005751 mitochondrial respiratory chain complex IV cellular_component
GO:0004129 cytochrome-c oxidase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU14152 False 365 TUCP 0.54 3 14316414 14319767
XM_022674130.1 True 576 mRNA 0.51 4 14316407 14321860

Neighbor

gene id symbol gene type direction distance location
LOC103036166 LOC108427338 coding upstream 74332 14232229 ~ 14242075 (+)
LOC103039204 NA coding upstream 85424 14225183 ~ 14230983 (+)
LOC111194173 NA coding upstream 102447 14201351 ~ 14213960 (+)
LOC103034911 LOC103034911,LOC108280870,LOC108427336 coding upstream 204210 14101866 ~ 14112197 (+)
mybpc2 mybpc2,LOC107729557,LOC107687621,LOC107680879,LOC107732898 coding upstream 1315312 12895896 ~ 13001095 (+)
LOC103037400 LOC108427346 coding downstream 28652 14350512 ~ 14352765 (+)
LOC103042394 NA coding downstream 583628 14905488 ~ 14908783 (+)
LOC103042699 NA coding downstream 592168 14914028 ~ 14919736 (+)
LOC103043011 tspan4b,LOC108427360,LOC107729542,LOC107658498,LOC107554115,LOC107730770,LOC108280533 coding downstream 603247 14925107 ~ 14936146 (+)
rcn3 rcn3,LOC107730752,LOC107689660,LOC107583008,LOC107554106 coding downstream 674272 14996132 ~ 15004852 (+)
G10358 LOC108427304,LOC105897688,LOC103034594,LOC108280818,LOC101477563,LOC107378498,LOC103367324 non-coding upstream 233330 14051656 ~ 14083077 (+)
G10359 ppp1caa,LOC103034594,LOC105897688,LOC108413689,LOC105894037,LOC108280818 non-coding upstream 269142 14042602 ~ 14047265 (+)
G10360 NA non-coding upstream 276673 14038961 ~ 14039734 (+)
G10366 NA non-coding upstream 281928 14034115 ~ 14034479 (+)
G10365 NA non-coding upstream 287784 14028250 ~ 14028623 (+)
G10495 NA non-coding downstream 22423 14344283 ~ 14346176 (+)
G10505 NA non-coding downstream 50640 14372500 ~ 14377042 (+)
G10528 smg1,LOC107564004 non-coding downstream 107094 14428954 ~ 14430878 (+)
G10597 NA non-coding downstream 385891 14707751 ~ 14708618 (+)
G10612 NA non-coding downstream 450002 14771862 ~ 14772076 (+)
G10450 LOC103035240,LOC108427335,LOC107732842,LOC107674167,LOC107563993,LOC107732871,LOC107658445,LOC107729508,LOC108280773 other upstream 152301 14117612 ~ 14164106 (+)
G10362 LOC108427334 other upstream 296312 14014352 ~ 14020095 (+)
G10200 LOC107747660 other upstream 1181289 13134601 ~ 13135118 (+)
akt1s1 akt1s1,LOC107564011,LOC107680841 other upstream 1494416 12774213 ~ 12821991 (+)
G10003 NA other upstream 1698210 12613691 ~ 12618197 (+)
G10503 tceb2,LOC103036770,LOC108427344,LOC107564001,LOC108280902,LOC105012960 other downstream 40005 14361865 ~ 14371518 (+)
G10510 smg1,LOC107729485,LOC107583093 other downstream 82543 14404403 ~ 14407441 (+)
LOC107197663 NA other downstream 479258 14801118 ~ 16050925 (+)
G10825 syt5a,LOC108427381,LOC107658481 other downstream 1328422 15650282 ~ 15655338 (+)
G10838 NA other downstream 1436902 15758762 ~ 15769243 (+)

Expression


Co-expression Network