G10503 (tceb2,LOC103036770,LOC108427344,LOC107564001,LOC108280902,LOC105012960)


Basic Information

Item Value
gene id G10503
gene name tceb2,LOC103036770,LOC108427344,LOC107564001,LOC108280902,LOC105012960
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 14361865 ~ 14371518 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU14176
CTGTGAGGAACCATTCGCACCACTGAGAAAAAGCAAGTTCTCAAAAACAAGACAGCAGGAGTTCTGTTTCTGGGATGAACACTATGTCAGCATTTGTTAAAACTAAACAATCAAAAGGTTTATGCAACTACGCCTTGTTCTTACTGGTCTGCAAAATGTAACTCAAGCCATTCTCTcaaccacccacacacacacacacactaactcactcgcacacaaagaaaaaaaaaaagtcgacCATGCGTTTACACTTCCCCTTtggtttaaatacaaaataagggAATCAAACAAAATGACACTGCTTTGTTTTTCAAATGAAACATGATAGAAGAACAGGAGACAAAACATTCCAGTATGGTGATggaaagaaaagcaaaaaacacgTCCAGAAGCAAAAATGCACAACAAATATTTCTACAATGAACCTATCACCTAGCTGTGGAGTATGGATTTTTCTTAGCGACGTCAGGGGGACAGGACTTCAACGCCTGTTCTGGTTTCTGTGCAGTTTCACACGCATTTTGCTAAATTACAAGAGAACGTAAAACTGCAACGTCAACCTTCAACATCCCCCAATGGCTCTTGGTAAAACTGAGTAATTGAGGGCCCCAAACAatgaataACAATTCTAGTGGGCACTGTAAAACTGCACAGCCACTCCagccctcaaaaaaaaaaaacccacccaCCCTTTACACAAGGCCAAAACACACAAAGCACATAAAGCTCAATTTTCCAAACTTAAACatgtgaattaaataaaaagtatgatttttaaatagtcTGCAATTTCACCACCCCTCCTCTAGACCTCAGCAGTCTGACCAATGAGCGATTAATACCAGAAATGCATGGAGACACATGAACAAATCAAAAACGTGCCCAAGCGTATACAGGGGGCGGGGTGGCGGGTCACGACCTTCGCACAGAGACCGGGTGCATGAAGGGTTCGAGATTAACACAGTCAGTCAGAGAGCCAGTGGCTAGAGAAGGGCTGCAAAGGAGAATAATTCAAAATTTCAGCAAAAGTCACAGCATCACACAGGATCACTCTACCTCATGCATACACACTGCCACGTTCAAACTAATCCTCTACATGCCTGATGTTTCCCCCCCAGTTCCCCTCCCTTTATCTCCCCCATCCTGCCCTCTGGTGTGTGTCCTCCATTGCTTCACTGCACCGCCTGCTCGTTGGCAGTGCTGCCGGAGTCCTGGGGCTTCATCACATCGGGCAGTTCAGGAGGACTGGAGAACGGTTCCACTCTCAGAGGCTCAAATGCATCATCGCTGACGCGAAAGGCCAGTCCTACTGTGGCTGGAGCCTGGGGTCTTGCTGTCTGGTTTGTGAATCCACAGTCTCCAAGAGTCTTGCTGTCTTCTAGCAACATGTCATCCTTGTAAAGTCTCTGTTCCTCAGGCGGTCGCTTCAGGATGCCTTCCACAATACGTTTGAGTTCATAGACTGTAGTAGACTCCTTAGCATCTGTGAAGATGGTCGTCTTGTGACGTCTGATCATCAAAAACACATCCATTTCTGTTACCGGTCGCAGTCCTCCACTGTCCCACACTGCACTGCGCTCATTACTCCGCCTTTGTGCAGCTGCTCCACAACAACACTCATCAACACTTCATTCAGCTCCAC

Function

symbol description
tceb2 elongin-B

NR:

description
elongin-B

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU14176 True 1642 TUCP 0.46 6 14361865 14371518

Neighbor

gene id symbol gene type direction distance location
LOC103037400 LOC108427346 coding upstream 9100 14350512 ~ 14352765 (+)
LOC103036166 LOC108427338 coding upstream 119790 14232229 ~ 14242075 (+)
LOC103039204 NA coding upstream 130882 14225183 ~ 14230983 (+)
LOC111194173 NA coding upstream 147905 14201351 ~ 14213960 (+)
LOC103034911 LOC103034911,LOC108280870,LOC108427336 coding upstream 249668 14101866 ~ 14112197 (+)
LOC103042394 NA coding downstream 533970 14905488 ~ 14908783 (+)
LOC103042699 NA coding downstream 542510 14914028 ~ 14919736 (+)
LOC103043011 tspan4b,LOC108427360,LOC107729542,LOC107658498,LOC107554115,LOC107730770,LOC108280533 coding downstream 553589 14925107 ~ 14936146 (+)
rcn3 rcn3,LOC107730752,LOC107689660,LOC107583008,LOC107554106 coding downstream 624614 14996132 ~ 15004852 (+)
polr3d polr3d coding downstream 643322 15014840 ~ 15021821 (+)
G10495 NA non-coding upstream 15689 14344283 ~ 14346176 (+)
G10358 LOC108427304,LOC105897688,LOC103034594,LOC108280818,LOC101477563,LOC107378498,LOC103367324 non-coding upstream 278788 14051656 ~ 14083077 (+)
G10359 ppp1caa,LOC103034594,LOC105897688,LOC108413689,LOC105894037,LOC108280818 non-coding upstream 314600 14042602 ~ 14047265 (+)
G10360 NA non-coding upstream 322131 14038961 ~ 14039734 (+)
G10366 NA non-coding upstream 327386 14034115 ~ 14034479 (+)
G10505 NA non-coding downstream 982 14372500 ~ 14377042 (+)
G10528 smg1,LOC107564004 non-coding downstream 57436 14428954 ~ 14430878 (+)
G10597 NA non-coding downstream 336233 14707751 ~ 14708618 (+)
G10612 NA non-coding downstream 400344 14771862 ~ 14772076 (+)
G10613 NA non-coding downstream 402200 14773718 ~ 14775700 (+)
LOC103036470 NA other upstream 40005 14316407 ~ 14321860 (+)
G10450 LOC103035240,LOC108427335,LOC107732842,LOC107674167,LOC107563993,LOC107732871,LOC107658445,LOC107729508,LOC108280773 other upstream 197759 14117612 ~ 14164106 (+)
G10362 LOC108427334 other upstream 341770 14014352 ~ 14020095 (+)
G10200 LOC107747660 other upstream 1226747 13134601 ~ 13135118 (+)
akt1s1 akt1s1,LOC107564011,LOC107680841 other upstream 1539874 12774213 ~ 12821991 (+)
G10510 smg1,LOC107729485,LOC107583093 other downstream 32885 14404403 ~ 14407441 (+)
LOC107197663 NA other downstream 429600 14801118 ~ 16050925 (+)
G10825 syt5a,LOC108427381,LOC107658481 other downstream 1278764 15650282 ~ 15655338 (+)
G10838 NA other downstream 1387244 15758762 ~ 15769243 (+)
G10879 NA other downstream 1581328 15952846 ~ 15960378 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location