G15141


Basic Information

Item Value
gene id G15141
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 32822574 ~ 32841503 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU20367
acacacacacaaacacacactcttacacacactcttacaccctctctatcttacacacacacacaaacacacactcttacacacattcTTACACCCTCtctatcttacacacacacacaaacacacactcttacacacactcttacaccctctctatcttacacacacacacaaacacacactcttacacacactcttacacacagacacacacgcacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU20367 True 220 lncRNA 0.42 2 32822574 32841503

Neighbor

gene id symbol gene type direction distance location
thegl NA coding upstream 13240 32801334 ~ 32809334 (+)
arl9 arl9,LOC107552351,LOC107729322,LOC107731368,LOC107662170 coding upstream 23687 32795318 ~ 32798887 (+)
srp72 srp72,LOC107662169,LOC107552350,LOC107731365 coding upstream 28218 32784186 ~ 32794356 (+)
LOC103039461 LOC108277608,LOC108432448 coding upstream 127113 32660879 ~ 32695461 (+)
noa1 NA coding upstream 176853 32639913 ~ 32645721 (+)
slc16a2 slc16a2,LOC107731360,LOC107758472,LOC107552352,LOC108279893 coding downstream 36210 32877713 ~ 32906232 (+)
ints10 ints10 coding downstream 103196 32944699 ~ 32955288 (+)
LOC103038530 NA coding downstream 123409 32964912 ~ 32973457 (+)
LOC103027883 ube2kb,ube2k,LOC108261162,LOC107750257,LOC107559588,LOC107684862,LOC107676795,LOC100708886 coding downstream 132894 32974397 ~ 32982157 (+)
LOC103034989 LOC108434520 coding downstream 147621 32989124 ~ 32992710 (+)
G15125 NA non-coding upstream 56368 32747931 ~ 32766206 (+)
G15119 NA non-coding upstream 86376 32733830 ~ 32736198 (+)
G15120 NA non-coding upstream 88948 32732245 ~ 32733626 (+)
G15121 NA non-coding upstream 100943 32721307 ~ 32721631 (+)
G15117 NA non-coding upstream 114719 32707629 ~ 32707855 (+)
G15162 NA non-coding downstream 55923 32897426 ~ 32912141 (+)
G15163 NA non-coding downstream 58949 32900452 ~ 32910957 (+)
G15166 NA non-coding downstream 61853 32903356 ~ 32970944 (+)
G15167 NA non-coding downstream 70726 32912229 ~ 32913561 (+)
G15169 NA non-coding downstream 85079 32926582 ~ 32983383 (+)
G14985 NA other upstream 643976 32174401 ~ 32178598 (+)
smim13 smim13,si:dkey-206d17.5,LOC107559689,LOC107551766,LOC107669968,LOC107734024 other upstream 777511 32041035 ~ 32045063 (+)
LOC103035097 fam193b other upstream 1644982 31161067 ~ 31177592 (+)
LOC103032125 NA other upstream 2050421 30739044 ~ 30772153 (+)
G14638 rps15a,MGC114789,RPS15A,LOC107686992 other upstream 2554192 30260677 ~ 30268382 (+)
G15160 NA other downstream 79521 32921024 ~ 32924785 (+)
G15170 NA other downstream 181733 33023236 ~ 33066558 (+)
nsg1 LOC108431918 other downstream 1181820 34023323 ~ 34121443 (+)
G15411 mcm7,LOC102777806,LOC107716516,LOC107744067,LOC107665623 other downstream 1378440 34219943 ~ 34228038 (+)

Expression


Co-expression Network