G36074


Basic Information

Item Value
gene id G36074
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 12709808 ~ 12711545 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU48566
aagtaacaaaatgaaaaatcatgAGCAAAGCATAAGACTTGTAATGAAATTCTAGACTGATCTGAGAACAGTCATATTATGGACTCAGACATAAGCCTGAGGCCATTTCAGCCTTGTTTACTGAATCACCTTCACTCGAACTGGACTCGATTTGGCCTTATATATATACGATATGATTACGGTTTCGTAAAAATGCATAGAATGAGCCGAGAAAAACGGCTCAacattacataattacataattcactgagaaaaaaatgtctgtatgaTTATCAGTACAACAAATTATGGAGAAGAAAGAGGAAAGAGGGAGATTCTTTTCAACAGAATTAGAGCCTCTGGTTTATCCCAGcTTGCATACAGGACACGCCcccttttcctctttttcttttcacagCGAGTAAATTATTGGGCTTGCACTGACTCTTCTCAGtgcagtatatttatatagattaaGAATACAGATAGGAGGCTAATTCTCGTAAGTCTGCTGTCCTCCCAGAAGCGTCCTGGAAAGTAAGTAAGATTAGATTGAGAGACAGGCAGCTAAAAGGTTAATAGACTGGTAgagtattaaagtaaattattcatttattaggGCAATATATTACGCAGGaaacccataaaagagaacTTCGTTGTGAAATTGACTTCTTTTATgttgtaaaacatgataaaaatgtactaacctccactctcctgcagctttccgagaaacaggcatattttttttttattttgcactgataaattgctttttacaccattattcaggctcaaagttgCTCCACACCTTATAGGTAggatccagagagccctgatttttaaaacgaggcattaagaagtttaaaagtgcactttaaaagatgtctgtctttgttaaagaacacaatacaaagtatttcagcatgaaagcaggtatttgtaatgtgtgacagctgCTACATGCGACgagatgtagtaatgaatcattactacattttgtgtatatgtcattatcagtacagtgatggagGCACTCTGAGCTACAAAGAagtgttatgggatgtaaacagtggtttttaataagcttcttgtgcacttttcaagtcattaatgcctcgttttaaatgtcagagctctctaGATTCTagcaatgaggtgtggagctactttgagctggataacggtgtaaaaagtgatttattggaGCAAAATATGCCCAAAAGTGGCaaaaagcacaaaatactgaatctcagaaagctgcaggagagcagcggcgggctattcaacaaaggtaagtactttttatcatgttttactacacaaaaaaaagtccattttacattgaagttctcctttaaaacccTAAAACCTCCACATTCTTCATTACACCAGCTTTTAACATACTATAAACCTATGTTGGGCGTCAGAGGAGTCCAGAACTCCAGGCTTGAGCAGCTTGAGCAGGGAATTCTGCTGAATACTCTTTTATAAAAACAGAGGTTTTCATCAGGTGTGGCACTGAAGAGTCCCTGGTGGCTTCCAGCAGGGTAAAACAGCTCAAGTGGAGACAGAAACGTGACAAGTCTTTTGCACGAGTGAGACTCGGCCACATCACACGgccaacatctctctctctggcttctTCTTCGGCGTTTCCTTTTCCTTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU48566 True 1652 TUCP 0.38 4 12709808 12711545

Neighbor

gene id symbol gene type direction distance location
LOC103039695 LOC108429709 coding downstream 6977 12698588 ~ 12702831 (-)
trnaq-uug NA coding downstream 41021 12668716 ~ 12668787 (-)
trnaq-cug_2 NA coding downstream 41901 12667836 ~ 12667907 (-)
ppp2r2d ppp2r2d,LOC107553689,LOC105009682 coding downstream 106428 12575511 ~ 12603380 (-)
tcerg1l tcerg1l coding downstream 292538 12243281 ~ 12417270 (-)
LOC103038875 NA coding upstream 125623 12837168 ~ 12914367 (-)
LOC103038558 NA coding upstream 214688 12926233 ~ 12928968 (-)
trnam-cau_19 NA coding upstream 486157 13197702 ~ 13197775 (-)
trnam-cau_20 NA coding upstream 488621 13200166 ~ 13200238 (-)
LOC111192419 NA coding upstream 496049 13207594 ~ 13209507 (-)
G36075 NA non-coding downstream 3631 12704352 ~ 12706177 (-)
G36080 NA non-coding downstream 14149 12694826 ~ 12695659 (-)
G36082 NA non-coding downstream 23411 12686026 ~ 12686397 (-)
G36061 NA non-coding downstream 104452 12604995 ~ 12605356 (-)
G36047 NA non-coding downstream 134357 12574929 ~ 12575451 (-)
G36100 NA non-coding upstream 119797 12831342 ~ 12832622 (-)
G36093 NA non-coding upstream 123089 12834634 ~ 12849471 (-)
G36104 NA non-coding upstream 219280 12930825 ~ 12945228 (-)
G36115 NA non-coding upstream 242778 12954323 ~ 12954745 (-)
G36122 NA non-coding upstream 279529 12991074 ~ 12991421 (-)
LOC103036331 NA other downstream 637381 12067533 ~ 12072427 (-)
clrn3 NA other downstream 1626626 11053659 ~ 11083182 (-)
rpl38 NA other downstream 3278580 9426075 ~ 9431228 (-)
G35512 NA other downstream 3503897 9204570 ~ 9205911 (-)
tbata NA other downstream 3705912 8938933 ~ 9003896 (-)
lsm5 lsm5,LOC107653262,LOC107727957,LOC107674592 other upstream 595543 13307088 ~ 13311525 (-)
p4ha1 p4ha1,p4ha1a,LOC107753313,LOC108273903,LOC107560551,LOC107684765 other upstream 763621 13475166 ~ 13500177 (-)
c4h10orf88 LOC103041415 other upstream 2074407 14785952 ~ 14797212 (-)
G36677 NA other upstream 3035855 15747400 ~ 15774593 (-)
LOC103023526 ndua4,ndufa4,LOC103023526,LOC108443163,LOC107745684,LOC107684782,LOC107569184 other upstream 3125560 15837105 ~ 15840516 (-)

Expression


Co-expression Network