trnam-cau_20


Basic Information

Item Value
gene id trnam-cau_20
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 13200166 ~ 13200238 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnam-cau_20
GCCTCGTTAGCGCAGTAGGTAGCGCGTCAGTCTCATAATCTGAAGGTCGTGAGTTCGATCCTCACACGGGGca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnam-cau_20 True 73 tRNA 0.56 1 13200166 13200238

Neighbor

gene id symbol gene type direction distance location
trnam-cau_19 NA coding downstream 2391 13197702 ~ 13197775 (-)
LOC103038558 NA coding downstream 271198 12926233 ~ 12928968 (-)
LOC103038875 NA coding downstream 285799 12837168 ~ 12914367 (-)
LOC103039695 LOC108429709 coding downstream 497335 12698588 ~ 12702831 (-)
trnaq-uug NA coding downstream 531379 12668716 ~ 12668787 (-)
LOC111192419 NA coding upstream 7356 13207594 ~ 13209507 (-)
LOC103042955 LOC108431373,LOC106578596,LOC103365861,LOC106590056 coding upstream 54210 13254448 ~ 13260826 (-)
LOC103042649 NA coding upstream 71637 13271875 ~ 13297430 (-)
avl9 avl9,LOC102783546 coding upstream 112314 13312552 ~ 13336023 (-)
kbtbd2 kbtbd2,LOC107711671,LOC107674719,LOC107660299,LOC107708283,LOC107551836 coding upstream 139255 13339493 ~ 13351094 (-)
G36114 NA non-coding downstream 189154 13006516 ~ 13011012 (-)
G36125 NA non-coding downstream 194419 13005499 ~ 13005747 (-)
G36124 NA non-coding downstream 198147 13001731 ~ 13002019 (-)
G36123 NA non-coding downstream 205279 12994574 ~ 12994887 (-)
G36122 NA non-coding downstream 208745 12991074 ~ 12991421 (-)
G36223 NA non-coding upstream 245809 13446047 ~ 13450206 (-)
G36236 NA non-coding upstream 301058 13501296 ~ 13504050 (-)
G36253 NA non-coding upstream 358980 13559218 ~ 13573367 (-)
G36257 NA non-coding upstream 387548 13587786 ~ 13609936 (-)
G36283 NA non-coding upstream 478558 13678796 ~ 13758346 (-)
G36074 NA other downstream 488621 12709808 ~ 12711545 (-)
LOC103036331 NA other downstream 1127739 12067533 ~ 12072427 (-)
clrn3 NA other downstream 2116984 11053659 ~ 11083182 (-)
rpl38 NA other downstream 3768938 9426075 ~ 9431228 (-)
G35512 NA other downstream 3994255 9204570 ~ 9205911 (-)
lsm5 lsm5,LOC107653262,LOC107727957,LOC107674592 other upstream 106850 13307088 ~ 13311525 (-)
p4ha1 p4ha1,p4ha1a,LOC107753313,LOC108273903,LOC107560551,LOC107684765 other upstream 274928 13475166 ~ 13500177 (-)
c4h10orf88 LOC103041415 other upstream 1585714 14785952 ~ 14797212 (-)
G36677 NA other upstream 2547162 15747400 ~ 15774593 (-)
LOC103023526 ndua4,ndufa4,LOC103023526,LOC108443163,LOC107745684,LOC107684782,LOC107569184 other upstream 2636867 15837105 ~ 15840516 (-)

Expression


Co-expression Network