LOC103042955 (LOC108431373,LOC106578596,LOC103365861,LOC106590056)


Basic Information

Item Value
gene id LOC103042955
gene name LOC108431373,LOC106578596,LOC103365861,LOC106590056
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 13254448 ~ 13260826 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022669130.1
ctcagaaaaaaagaggaggGAGAGGCTAGTGCACAGAACTCCAGCTGCTGAGTGACGATGCACTCACAGCcaggagaagtgtgtgtgtgtgtgtgtgtgtgtatgcgacTGCACTGCCTCTGCGATATGCAATGGATTCAGAGATGATCCCTCACTCTCTGCTTTTCTGATCTTCTCCTGAGCTCGGTGACTGCTGTCTCTTTTTgctttctcctttttctttcacctttttctctttgttctttttttgtatctCTTTTTTCTATTGCTAACTggaattaaatgcattttatttactttgcaTCAGCTTCTGCCTTCTAGTTTTGGACAGTTTTAGCTCTTTTGCCTGATTATACACCTTATTAGGCTCTTATCAAATAAGctcttctttattttccttccttcttaattttttttctggccTCTTCTGACATGCTTGAAGAAGACTCTGACACCTGTGGACCTTTACTTTAAAAGCTGACTGCAAACAAAAGGTGAGAAAACTATTTCCATCATTTTGGTGACTGAACATGGACATGGAACACAGTGGACACTCTTAATTCTTCTTGACATGTTAAGAACTTCAGTTTAAAACTATGTAGAACCTTCCAGAACTCTTCAAAAGATGAATACCACCCTGCACTATGGACTTATCCAGGTCTACAACGCTAGGAACCGCAGCGTTGCTAGCATGCCCGTCCACAGAGACGCTCAAGGTGCTAAAGACTCGTCATCTTCATCCTCGCACGGATGCTACAAACAGCTGCTAATCTCAACAGAAGTGTTCCTCACTCTGGGCATTGTCAGCCTGCTGGAGAACATCCTGGTGATAGCGGCTATCGCCAAGAACAAGAACCTGCACTCGCCCATGTACTTCTTCATCTGCAGCTTGGCTGTGGCGGACATGTTGGTTAGCGTCTCCAACGCTTCGGAGACCATCGTGATCGCCCTGATCAGCGGCGGGAACGTCTCGATCTCAGCTGGAGTGATTCGCAACATGGACAACATCTTCGACTCCATGATCTGCAGTTCGTTATTAGCGTCTATCTGCAGCTTGCTAGCTATCGCCGTCGATCGCTACATTACCATCTTCTATGCGCTACGCTACCATCACATCGTGACGGTCCGTCGCACGCTAGCCGTCATCAGCTGCATCTGGGCATGTTGCACAGTCTCAGGCGTCCTTTTCATCGTTTACTCGGAGAGCACGACTGTGCTGGTGTGCCTTATCAGCATGTTCTTCACCATGCTAGCCCTCATGGCCTCGCTCTACGTCCACATGTTCCTGCTGGCGCGGCTCCATATCAAGCGCATCGCGGCTCTGCCGGGCCACGCCCCCATTCGCCAGAGGGCCAACATGAAGGGGGCCGTGACCCTAACGATCCTGCTGGGTGTTTTTGTGGTCTGCTGGGCGCCGTTCTTCTTGCACCTCATCCTTATGATCACCTGCCCCAGGAATCCCTACTGTGCTTGCTTCATGTCCCATTTTAACATGTACCTCATCCTTATCATGTGCAACTCTGTCATCGATCCGCTCATCTACGCCTTCAGAAGCCACGAGATGCGGAAAACCTTCAAGGAGATCTTCTGCTGCTGGTACAGCCTGCCCAACGTCTGCGTATCTGAGCCCACTGAATCATGCTAAATACTGGTGATTGGTGCACAGTTGGGTTTGGCATCTGCTGAGATGGTCATCACCTTATCAAAAAGCATGATGAGCAATTTATGAGAAACCCACCTGttaatcaatttaatttaaagattcTGCTGTGACTATTCAAGAGAAGACTAAAGAGAGGGAAGAGAACATTGTGGGTTGGAGTTTGGGCAATTTCTGCTTGCCGAAAGAAGTTAAAGTAAGTGAAGCCAGTGAAGGAGAGACAAAAGGAAGGAAACAGTTGGTTGAGGTTTCTGAAAACCTGATGTACATACATGTAGACAAGGTAGCGGTCATCAGATATCAGAATTGAGAAGATGGACTTCAGGCATGTTCCTCTTCccaaatattttgtcattttcatAACATCACTTGGGGtgtctcatctttttttttttaactctgttatCGAACCACTTTCGATCTACTCCTTCTAAAGCAATGAGATGTGGAAAACCTTCAAGGAGATCTCTTGCAATTGGTACAGCCTGCCTAACATCTAGCTGTGTATCTAAGCCAACTGAAAAGGTGCTAAAAAGGGGGGTAGGCGGTTGGGGTTGGCATTGGCACCTGTCCCCTCTGCTGAGCTGGTCGTTACCATATCATAAATGCTGTTCAAGTTATGGGAAATGCACCAGGTCGTTAATTTATTTAGAAGAATCTGAATATTAGAAACAAATACTTTGAtactaaaatttattttttgcctGAACATGCCATCAGTATCTGACTATTACTTCGAGATGCTTCTGCTTGCAGAAGGAAGTCATTTTGTCCTTCTTTGATTATTTAAGCCAGGTAGGAGAGATAAAAGGGGTAGACGGCTGGTTGAGGGTAGACATCATATTTATTGCATATTAAATTAAGAAGAGGGACTTCAGGCATGTTCCTCGTCCCAAATGTCCGATGTCTGTGAATCTGAGCCAACTGAATTGTGCTAAATATGGGGGTCAGTGTTGTGGTCGGCATTAATACTGGTCATCTCTGCTGAGTTGGTCGTCACTAGGGCTGCAGCTAATctgcaattaatgattattttgaaaGTCAACTAATCTGGCGattatttttccgattagtcaacatttatttctgccatgccctccaTCTCTGCTTGCTGTGAGTACGACTCCTGTGTCTAGCTTTCTTTGTACTCGATTTAAAtcgatagaaacagctaaacaaaGGTTTTTAATGCCCTTTAAATGTCCAGAACATTGTCCTTTAAATGTGAGaagtgctgatatttagtgaggaaatgtgtaatctgctgtgtttgggcacttttggagacccAGTACATTGTGAAGTGGTGCAAATTAACGAATAGTCAATGAACATTGAAATAGGCAATGAACATTTGGAGTCGCCAAATTTTTATAATCGatattgttgattatatcgactaatcgttgcagccctagtcttCACCTCAAAATAAAGCTGTTCAAATGCACTTAATGTTAATCAATTTCATTAGAAGAATCTGAATAATAGAGAGAAATGCTCTCAAGTTCAGAACATGCCGTCAGTATTTGACTATTTAACAGAACActaaagaaaggagagaaaacaTTTTGTTACAGGTATAATGGTAAAAACGTGAGATATGTTTCATAAAGTGATTTTATGAAAGTAACCAAACGTTTAGGAGGAGGAACATGCCTGAAGTGCCTCTTCTCAatctaatattatataaatttaatCTCTACCTTGTTTACAGGTATCTACATCAATTTTTACACCAATCAACCACCCTTTCTAATAAGGAAAGTCAAGAAGGAGAGATAAGTGAGGGAGGAGATGAATGGAGGAGGGTTGTGAAGACCTGATAGACCTGATATAGACATGTGTGAAGGAGATCATATTTATAGAATATTAGATTGAAAAGAGGAACTTCAGGCATGTTCCTCCTCccaaacattttataatataatataatataagctTTATATTGTGCAGATTGCCATTACCATCCAGGACCAGACTTCATTAAGATTATGTTAATTCTATAGAccatgtaaatatgtaaatataactTGGACAAAAGCTGTGACACTGTGAACATTGCTGTCTTGCAGGGAACTGGTTCTGCTCcacataaaaaaggaaaaaagctcTTCAGAAAAAGATCAGTTTCCTTCTTATCCTAAATGTAGAGGAACAGCCAGTACCTGATAAGCTATTGTACAGTAGCTATTGTACGAGTAATGAAAGCTTATCTGTGCAGCCTGTGTGCATAAATCACTGCACACTTGCCTCAAAGCATACTGCATTCTGCAATCCTGATTCACTTgctgatatatatattcaattcaatttaattcaatttatgtatgtgtatatgtgtgtgtgctgacatTATTGTTAGTCCTTCTGTTTTCTGTATAGATGTGAAGATACGGTTTTATCAGAAACTAGACCTGCATGATGTGGAAATTAAAAGCTTGAGGCCATATAAATGGTTTTGTCTTGGTTTTGGAGATCTTGAGAGTTTTGAGGGTCTTGAACCAACTGAGCACAATGcttttatttctataattatttatttttttctgtgtgagTATAGCTGTATGAAATTTAGCACAACCACTTGTTGATTGGAACAGGCACAAAATAAGTTCTTAccccatttttttgttttttttttaaatgagctaTTTGTTGGCTACATTAGGCTTATAGCTTTAATGCTAAAGTACAGAacagttatataaaataaactaacaaaaaaggGGGAAATTCCAATTTAAATTGGACCATTGAATGTCATACTGGGCAATGTGTTTAACCTATCCAGACCCTGCATCTGTTACAATAGACATcatgtctttcctttttttcaggttttgttgcacataacactaattgagactTTTGTCCATCAGAAATGACCAATAAACCAGCCGATGAAAGGGTCTGCAAGCCAATGAACTAGTAGCTGACGAGAGCCAACGAGGCAAAGTAAAGGctaatttttacttatttgatattatttaaaacacacaagGGATGGTTCGTGAAATAAAGTCAATTagatactttaatttaattggattacatttttacatagattttataataaaatattagatgTCTTCCTTAGTGTGCATCACAGAcagaaaatagcattttttttctgatatttttctatcactggaacataatttgggtctaaaagggttaaaatgtgttttctgtagTGCTCAGTCTATATAAAgcctaaatacatttttgcttcAAAAAAGTTTAGTTGCGGGCAGCAAATTATTATGCACTGCCGTCACCCAGTTCATGTATTAAATTAGaagttttggtaacactttacattaagtaaGTACAATAATTAATAGTACTATCAACATAATGcatctactaattattaattaggcattattaatcattacaacaTGTTTTAAACAATATCTTAATTCATTactatttacaacattcttcaTCATTAacaattagtttaataatgtcttaactagtgtaaatTAATAGCTACAATTAATTGCAGTATGCAATCACAGTACTGTTCTTCTTATGCCTTCTTTTTATtatacacgttttttttttttttttggcaattaTCGAGATATCAACTCCAATAGATTCCAATAGATTTTTGATTGaacagttttctttaaaaaatttgactgttttttttttttttgcttattaagAATGAATGCAGAGCAAAAGTGCACGTCCATGTACGTCCCAGTTTTTGAGATATGAAGACCAAATTCGGCATGCTTTTGGAAAATATGCCAATACTATTTTTGGACAATTGTTTTTACAAATTTTCTCCATAGGAATGAAAAGAGGGATCCAACATTCTGTCTCACACACCAGTTGAATCTGTGCACAGCACGCCTTCTCTACAATGCTCCTCAGTACTgtttgtgtatggaggagctgctggataaaccagctGTTGCTCAAATGTTTGGACAGCACACACGTCAATAAATGTTCTGTACAGTCTGTGCATGGAGGagcacagataccatagcaaccacttggcaccacattagcaacaccatagcagccatcaTGAACAACATAGCaatactttagcaaccacctagcaaccccatAGTAACCACCCACGAATCAGCAATGCAGtcacactcgcagtttctgcTGGCTAGTACTTAATGTAGTAAATACGGTTATGTGTcactcttattgtaaagtgttactgaaagTTTAGTAGGTACATTATATTCTCCCTCTCAGTCCTGCACTGACTGTCACTTTATAGGCTAtttgggttttatttttttattttttagatagaTGTGATTGTGATGATCATTAAAGCCTGACTTTACTGGTGAAGACAGTAATGGTTAATGcaacaaattaaattttaagGGACATAAAGATGTTAAAATTCTAAGCGCAGAGAAAAACTTATCGACTTATTCTGTTTGTGTTCTGATATTTAcgtgtttttattttgtgtgtgtttgtgtacataaATATTTGAATCCACCAGAACATTCAGCTGTGTAAACTGTGATGTCCTGAGGGGATTATATGGTAATTCAACTGACTAAATATAGCCTGTAGCCTTTTGGCATACAAAACAGACCAGAACGAACGCACATAAGAAAGAGAAAACcgataaacaaaaataatttaaaaggcaatttccattattttctttttactttatatCATTTGCTTAATTCTCattgtattttaattgtaatt

Function

NR:

description
PREDICTED: melanocortin receptor 4-like

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0040008 regulation of growth biological_process
GO:0005886 plasma membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004977 melanocortin receptor activity molecular_function

KEGG:

id description
K04202 MC4R; melanocortin 4 receptor

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022669130.1 True 6379 mRNA 0.39 1 13254448 13260826

Neighbor

gene id symbol gene type direction distance location
LOC111192419 NA coding downstream 44941 13207594 ~ 13209507 (-)
trnam-cau_20 NA coding downstream 54210 13200166 ~ 13200238 (-)
trnam-cau_19 NA coding downstream 56673 13197702 ~ 13197775 (-)
LOC103038558 NA coding downstream 325480 12926233 ~ 12928968 (-)
LOC103038875 NA coding downstream 340081 12837168 ~ 12914367 (-)
LOC103042649 NA coding upstream 11049 13271875 ~ 13297430 (-)
avl9 avl9,LOC102783546 coding upstream 51726 13312552 ~ 13336023 (-)
kbtbd2 kbtbd2,LOC107711671,LOC107674719,LOC107660299,LOC107708283,LOC107551836 coding upstream 78667 13339493 ~ 13351094 (-)
cdh20 cdh20 coding upstream 100910 13361736 ~ 13385263 (-)
LOC103043889 ppp1r9bb,LOC107741705,LOC107684769,LOC107713069,LOC107675672 coding upstream 130993 13391819 ~ 13420942 (-)
G36114 NA non-coding downstream 243436 13006516 ~ 13011012 (-)
G36125 NA non-coding downstream 248701 13005499 ~ 13005747 (-)
G36124 NA non-coding downstream 252429 13001731 ~ 13002019 (-)
G36123 NA non-coding downstream 259561 12994574 ~ 12994887 (-)
G36122 NA non-coding downstream 263027 12991074 ~ 12991421 (-)
G36223 NA non-coding upstream 185221 13446047 ~ 13450206 (-)
G36236 NA non-coding upstream 240470 13501296 ~ 13504050 (-)
G36253 NA non-coding upstream 298392 13559218 ~ 13573367 (-)
G36257 NA non-coding upstream 326960 13587786 ~ 13609936 (-)
G36283 NA non-coding upstream 417970 13678796 ~ 13758346 (-)
G36074 NA other downstream 542903 12709808 ~ 12711545 (-)
LOC103036331 NA other downstream 1182021 12067533 ~ 12072427 (-)
clrn3 NA other downstream 2171266 11053659 ~ 11083182 (-)
rpl38 NA other downstream 3823220 9426075 ~ 9431228 (-)
G35512 NA other downstream 4048537 9204570 ~ 9205911 (-)
lsm5 lsm5,LOC107653262,LOC107727957,LOC107674592 other upstream 46262 13307088 ~ 13311525 (-)
p4ha1 p4ha1,p4ha1a,LOC107753313,LOC108273903,LOC107560551,LOC107684765 other upstream 214340 13475166 ~ 13500177 (-)
c4h10orf88 LOC103041415 other upstream 1525126 14785952 ~ 14797212 (-)
G36677 NA other upstream 2486574 15747400 ~ 15774593 (-)
LOC103023526 ndua4,ndufa4,LOC103023526,LOC108443163,LOC107745684,LOC107684782,LOC107569184 other upstream 2576279 15837105 ~ 15840516 (-)

Expression


Co-expression Network