CI01000010_03912179_03913373


Basic Information

Item Value
gene id CI01000010_03912179_03913373
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000010
NCBI id null
chromosome length 12265998
location 3911683 ~ 3913373 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000010_03912179_03913373.mRNA
GTTTTGTTGAAAATTGCTGAAACATTTGACAGTCAACAAGACATAGAAGTACCATACAACACCCCTGAATGCAGAAGTCTGAAATCTGAAGTCCAAATAAGCACATTCGACCAAGATAATAATGTGACTGGTGACCTCTATATTGAAGAAATTGAGGAAGGAACCTTTCATGTTTTGGGACTGAAGGCTTTGGTTCACCAGAGTGAGCCATTGAGTGACATGTTGTGGTCCCGTAAAGCTGCGGGACAGGACATCCGCGAAGCCATCAGCCATTTTCACACTCAGAGACCTGGTCTACAGCCTCACTCACCTGCCATTACTTCAGGGAAGCATCTGATTGGTCATTGCCATGACAATATCAGTCTCACCCCCTTTAAAGTCATTGAAAGAGCCCATCATACATTTGACAAGGCCAGAATACAGAGAAACCTTGCAGAGAAGGTAACCGAGCGCCACATTGACCGTGAAGTAGCCAAAGGCCGCAGATCCGACTTCATGGAGGCTCGGAGGGCAGAAGTGCGTCTGCGTGAGGAGCGTGAAAGGGCGGATATGGAGAAAACTCTCACTCTACAGAGAGCCAGGCTAGAACAGGACGTCCATCATGCACGTCAGAAACATGCCCAGTTTCTGGAAGAGAAGAAGAGGAGGTTCCAGGAGCAAGAGATGGTTTGCAGTTTCAGCCAACAGCACAACTCTCTAGCGAGGGCCGTACTTAGATACAACACGTGGAAACGTGGTAACCAGCAATAGATGCATGTATGATTTTGATTATACTCAGTTTAACATGGAACATGACAATTGAATGTGTGTGTAAATTCAAAAGCAGACTTACTGTACTATAGTATAGAACAGTATAATATATTATAGTACTCACCAGAAGATGTCTGCAAAGATTATATATATAATAGATATTGAGATCTGCTCCTCTTTTCAATATCCAAAACATTACATAACAGGGATCCAAAAATACTCTCCTAATACACAACCACCCCCATCCGTCAGGCACAAGTCAAGAGCAACTAGTACTAAAGCCACAGTCTAACTTTACATAACAAATAATTCCACATTAACTGAGTCACCATTACACTCATTGAAATAGCACTTAAGAAATATGAATTGAATGGCATATTTTAGCAGGAGAACATAAGCAGAATTTTTGCTGTATTTCTCAACATTCATAGTATAACAGGAGGATCTTTAAATCATCTTTTAATGCCAAAGCCAGTTTCGCTTGAGAATGAATAAA

Function

NR:

description
hypothetical protein cypCar_00032910

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000010_03912179_03913373.mRNA True 1246 mRNA 0.42 2 3911683 3913373

Neighbor

gene id symbol gene type direction distance location
CI01000010_03890095_03899058 SSBP3B, SSBP3, SSBP2 coding downstream 12625 3890069 ~ 3899058 (-)
CI01000010_03787388_03880750 NA coding downstream 30933 3787388 ~ 3880750 (-)
CI01000010_03617450_03619486 NA coding downstream 292197 3617343 ~ 3619486 (-)
CI01000010_03557384_03566580 TAB3 coding downstream 343969 3556932 ~ 3567714 (-)
CI01000010_03544215_03547481 PRRG1 coding downstream 364202 3543520 ~ 3547481 (-)
CI01000010_03914320_03915250 LRRIQ3 coding upstream 879 3914252 ~ 3915250 (-)
CI01000010_03941555_03947042 NA coding upstream 28182 3941555 ~ 3947042 (-)
CI01000010_03961520_03974921 SLC44A5B, SLC44A5, SLC44A5A coding upstream 48046 3961419 ~ 3974921 (-)
CI01000010_03992093_03992619 NA coding upstream 77728 3991101 ~ 3993606 (-)
CI01000010_04028461_04031710 NA coding upstream 114924 4028297 ~ 4031710 (-)
G62699 NA non-coding downstream 279679 3631538 ~ 3632004 (-)
G62682 NA non-coding downstream 312648 3598826 ~ 3599035 (-)
G62650 NA non-coding downstream 473103 3438346 ~ 3438580 (-)
G62648 NA non-coding downstream 474755 3436698 ~ 3436928 (-)
G62636 NA non-coding downstream 508865 3402307 ~ 3402818 (-)
G64119 NA non-coding upstream 6297 3919670 ~ 3919890 (-)
G64126 NA non-coding upstream 16243 3929616 ~ 3931626 (-)
G64168 NA non-coding upstream 141164 4054537 ~ 4055332 (-)
G64169 NA non-coding upstream 143844 4057217 ~ 4059152 (-)
CI01000010_03527436_03530341 NA other downstream 380031 3527408 ~ 3530359 (-)
G61965 NA other downstream 2366632 1424425 ~ 1545051 (-)
G61888 NA other downstream 2665665 1244469 ~ 1246018 (-)
G61045 NA other downstream 3336172 572753 ~ 575511 (-)
G64237 NA other upstream 316577 4229950 ~ 4236416 (-)
CI01000010_04612793_04613017 SMIM15 other upstream 699123 4612460 ~ 4613135 (-)
G64564 NA other upstream 1135782 5049155 ~ 5242926 (-)
G64877 NA other upstream 2002884 5916257 ~ 5917011 (-)
G64918 NA other upstream 2180316 6093689 ~ 6096480 (-)

Expression


Co-expression Network