CI01000010_04028461_04031710


Basic Information

Item Value
gene id CI01000010_04028461_04031710
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000010
NCBI id null
chromosome length 12265998
location 4028297 ~ 4031710 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000010_04028461_04031710.mRNA
GATGCAATGTTGCTGTTGAAGATGTCCATGCCTTTGACGACCCAATCACCAGACTTGTGAATGACAGACAGGGTGAACGATGTTCGGGGCGAGTGGAGGTGCGTCATGGGCATCAGTGGGGCACCGTGTGCCAGCAGGGTTGGGATCTGGAGGATGCTGCAGTGGTTTGCCGAGAGCTTAACTGCGGCTTCGTGTTGGACATTCCGAGTGGCGCTCGTTTCGGGCGGGCCGGTGGAGAGGTGCTGTGGAGGGATGTGAAATGCTCGGGCGACGAGTTTGCCCTGGATCTCTGTGAACGTACCCTCAATGATGTGTGTACACACAGTGAGGATGCTGGAGTGGAGTGTACAGGAAAACTTCCAGCACCCACCTTGTCAATTCAGTCACGCTTCTATGCTTACTCGACCGGAGAAGCTGTTCACTTCAAATGCACTGCCCCATATTGGCAGTCTGTCATTGACTTCCATCTGTACAAAAGAGGTGTAGACACGCCACTAGTGACCCAGCGAGCCGATCCCAGACAAATGATGGTGGATCTGACTCTGTCAGACCTGGAAATCTCCCACCAGGGCAGCTACAGCTGTCTCTACAGGATACACAGCAAACTAGGAAACTCTGCTTCAGGAAATTCTCCACACAGCAACTTCATCAACATCACAGTCTTAGAGATTCATACTCCCCAAATCTGGTACAACACGTCTCCTGAGGCCCGGCCAGGTTGGGTCACCCGGGGCCACGGTTTCAATGTCACCTGTTCCACTCAGCCTCAGTATCCAGGAGGCTCCTTTCAGCTGCGGCTCATCAGGCCCAACGGGACCGTCCGGCACTCTCTGCCAGCCCTCGCTCCCTCTGTCACATTCACCTTCTCCAATGCCCAATCCAATAATGAGGGCTACTACTGCTGTCTCTACAAGGTCCAGACTGGAGAGCGCACATTTATCTCAAGAGAGAGTCAACCTTTACCCATCTCTATTCGAGAAGTTGATCCGGTGATGAGCCCGGTGGTCATCAGTTTGCTGGTATCCGGTTTGACGTTTGTGGTGGCAACATGTGCCATTCTGATTGTTGCCAAAGTGTACTGCAAGAGAGCGAGGAAACCCACTGAACTGGAGCGAGAGAGTAGGACCTCAACTAGAGGCTTCTCTAAACTGGTCACTTGGTCCATCTGAGGTTGGTGTTTCAGTGTCATGTCCAAACCAAAGGGAAGATCGAAGTTTTAAGAACCACAGAAACCACCCTTTCTTACTGTCTGCCATTCTCTGTCAGTTACAGAGAAACACATTTCGATTGTCATTGGTTGGAGTTTTTTTCTTTTGGTGTTTTTATAAGTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000010_04028461_04031710.mRNA True 1333 mRNA 0.51 6 4028297 4031710

Neighbor

gene id symbol gene type direction distance location
CI01000010_03992093_03992619 NA coding downstream 34691 3991101 ~ 3993606 (-)
CI01000010_03961520_03974921 SLC44A5B, SLC44A5, SLC44A5A coding downstream 53376 3961419 ~ 3974921 (-)
CI01000010_03941555_03947042 NA coding downstream 81255 3941555 ~ 3947042 (-)
CI01000010_03914320_03915250 LRRIQ3 coding downstream 113047 3914252 ~ 3915250 (-)
CI01000010_03912179_03913373 NA coding downstream 114924 3911683 ~ 3913373 (-)
CI01000010_04153653_04157398 NA coding upstream 120170 4151880 ~ 4158138 (-)
CI01000010_04311215_04316218 NA coding upstream 279024 4310734 ~ 4316671 (-)
CI01000010_04356379_04367982 NA coding upstream 324627 4356337 ~ 4368250 (-)
CI01000010_04374856_04376532 CENPH coding upstream 342798 4374508 ~ 4376946 (-)
CI01000010_04383043_04410672 MIER3B coding upstream 351161 4382871 ~ 4412332 (-)
G64126 NA non-coding downstream 96671 3929616 ~ 3931626 (-)
G64119 NA non-coding downstream 108407 3919670 ~ 3919890 (-)
G62699 NA non-coding downstream 396293 3631538 ~ 3632004 (-)
G62682 NA non-coding downstream 429262 3598826 ~ 3599035 (-)
G64168 NA non-coding upstream 22827 4054537 ~ 4055332 (-)
G64169 NA non-coding upstream 25507 4057217 ~ 4059152 (-)
G64332 NA non-coding upstream 186043 4217753 ~ 4220928 (-)
G64237 NA non-coding upstream 199483 4229950 ~ 4236416 (-)
G64382 NA non-coding upstream 251046 4282756 ~ 4283085 (-)
CI01000010_03890095_03899058 SSBP3B, SSBP3, SSBP2 other downstream 128386 3890069 ~ 3899058 (-)
CI01000010_03527436_03530341 NA other downstream 496645 3527408 ~ 3530359 (-)
G61965 NA other downstream 2483246 1424425 ~ 1545051 (-)
G61888 NA other downstream 2782279 1244469 ~ 1246018 (-)
G61045 NA other downstream 3452786 572753 ~ 575511 (-)
CI01000010_04612793_04613017 SMIM15 other upstream 580786 4612460 ~ 4613135 (-)
G64564 NA other upstream 1017445 5049155 ~ 5242926 (-)
G64877 NA other upstream 1884547 5916257 ~ 5917011 (-)
G64918 NA other upstream 2061979 6093689 ~ 6096480 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_035548 si:ch211-150o23.3 coding NC_007119.7 CM002892.2 17775247 ~ 17784723 (+)